| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1786 |
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| Symbol | |
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| ID | 4810031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2106433 |
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| End bp | 2107797 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640107200 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001038200 |
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| Protein GI | 125974290 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000301687 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC AAAAATCGTT TTATGTGTGT CAGGAATGCG GCTATGAAAG TATTGGCTGG
ATGGGTAAAT GTCCTTCCTG CAATCAGTGG AACACCTTTG TGGAGGAGAT TCAGGAACCA
AAAAGTAAAA GCAGGAGCGG AGCTGTTTCC ACCAATGTGA AGCCGGTTAA TATAAATGAC
ATAGAAGCGG ATACTGAAGA ACGTTATCTT ACGGGAATAA AGGAAATGGA CCGGGTACTC
GGAGGTGGAA TTGTAAAAGG TTCCCTTATT CTTGTGGGTG GAGATCCGGG TATAGGCAAA
TCCACTCTTT TGCTGCAGAT ATGCGACAAA ATAAAGACAA ATGCCAAAAT TTTATATGTT
TCCGGCGAGG AATCTATTAA GCAAATAAAG CTGCGAGCCG ATAGATTGAA TGTAAGGAAT
CCCAATCTGC TGATGTTGTC TGAAACAAAC TTTAAAGTCA TACAGGCTCT GAGCGAAACC
GAACGGCCGG ATCTTATTGT AATCGATTCA ATACAAACGA TGTTTAATGA TGAACTTCCC
TCAGCTCCGG GAAGTGTAAG CCAGGTAAGG GAAATTACCT CCGGACTCAT GAGAATTGCA
AAAACGCTGA ACATAGCGAT AATAATTGTG GGCCATGTAA CCAAAGAGGG AGCTATAGCA
GGACCCAGGG TTCTTGAGCA CATGGTGGAC ACTGTGCTGT ACTTTGAGGG CGAAAGACAT
TTAAGTTACA GGATTTTGAG AGCGGTAAAG AACCGCTTTG GCTCCACAAA CGAAATAGGC
ATATTCGAGA TGCGGGATGT GGGGCTTGTG GAAGTGGAAA ATCCGTCATC AATGCTTTTG
TCGGAAAGAA CGGAAAGCGT TCCGGGTTCT GTGGCGGTAG CAACTTTGGA AGGCACAAGG
CCCATGCTGA TAGAAATTCA GGCACTGGTC TGTCCCACAA GTTTCGGGAT GCCCAGGAGA
ATGGCAACCG GACTGGATTA CAACAGGATT ACTTTGCTTA TGGCGGTTTT GGAAAAGAGA
GTGGGCATGC AGCTTCACAA TTATGACGCA TATGTAAACG TAGTGGGAGG ACTTAAGATT
GATGAACCTG CATGCGACCT TGGTGTGGTG ACTGCCATAG CTTCGAGCTT TAGAAACATA
CCGGTGGATA TGGATACCGT TTTAATAGGA GAAGTCGGCC TGACCGGGGA GGTTAGGGCT
GTAAGCCAGA TAGACAAAAG AATCAGAGAG GCCGTGAGAA TAGGTTTTAA GAATTGTGTT
GTTCCTGCTG GAAATATGAA GGTTATAAAG CAGATGAAAG ATATAAATAA TATAAATGTA
AAGTTCGTGG AGAATGTACA GGAGGCATTG AATATAATTC TATAG
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| Protein sequence | MPKQKSFYVC QECGYESIGW MGKCPSCNQW NTFVEEIQEP KSKSRSGAVS TNVKPVNIND
IEADTEERYL TGIKEMDRVL GGGIVKGSLI LVGGDPGIGK STLLLQICDK IKTNAKILYV
SGEESIKQIK LRADRLNVRN PNLLMLSETN FKVIQALSET ERPDLIVIDS IQTMFNDELP
SAPGSVSQVR EITSGLMRIA KTLNIAIIIV GHVTKEGAIA GPRVLEHMVD TVLYFEGERH
LSYRILRAVK NRFGSTNEIG IFEMRDVGLV EVENPSSMLL SERTESVPGS VAVATLEGTR
PMLIEIQALV CPTSFGMPRR MATGLDYNRI TLLMAVLEKR VGMQLHNYDA YVNVVGGLKI
DEPACDLGVV TAIASSFRNI PVDMDTVLIG EVGLTGEVRA VSQIDKRIRE AVRIGFKNCV
VPAGNMKVIK QMKDINNINV KFVENVQEAL NIIL
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