Gene Cthe_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1593 
Symbol 
ID4809584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1925740 
End bp1926309 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content43% 
IMG OID640107011 
ProductNUDIX hydrolase 
Protein accessionYP_001038012 
Protein GI125974102 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCC TGGACATTGT TGATGAACAC GGTAATCCCA CCGGTAAAAC TGTAGAACGC 
CAAAAAGCTC ATGAAGAAGG TATATTGCAC AGGACATCGC ATGTCTGGAT TCTCAGGGAA 
AAGCAGGGCA AGATCCAAGT CCTGCTGCAG AAGAGGTCTG GAAGCAAGGA ATCATACCCT 
GAATGCTATG ATATTTCAAG TGCCGGTCAT ATTCCTGCAG GAATGGATTT TGTCGAATCG 
GCCATAAGAG AGCTGCAAGA GGAATTGGGA ATTTCAGCAT CCGCTGATGA ACTTATATTC 
TGTGGAAACA GGACTGTAGT CTGGGATGAT TATATCTGCG GTAAACCTTT TCATGACAGG 
CAATATACGC GAGTATTCAT TCTGTGGCGG GATATAGATG AGGAAGAATT TATACTTCAA 
AAAGAAGAGG TAGACAGTGT ACTTTGGATG GATCTGGACG AGTGTATTGC AGCGGTTGAA 
AATAACCGAA TAAAGCATTG CATATACCTG GGTGAACTAA AAATGGTAAA AGATGCCTGT 
AAACGCAAGG TAGACCCCGG AAAACTTTGA
 
Protein sequence
MEILDIVDEH GNPTGKTVER QKAHEEGILH RTSHVWILRE KQGKIQVLLQ KRSGSKESYP 
ECYDISSAGH IPAGMDFVES AIRELQEELG ISASADELIF CGNRTVVWDD YICGKPFHDR 
QYTRVFILWR DIDEEEFILQ KEEVDSVLWM DLDECIAAVE NNRIKHCIYL GELKMVKDAC 
KRKVDPGKL