Gene Cthe_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1577 
Symbol 
ID4809568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1906032 
End bp1907576 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content50% 
IMG OID640106995 
Producthypothetical protein 
Protein accessionYP_001037996 
Protein GI125974086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAGACA TTTCCATGGA GCGCGTGAAT GAAACGCGCA AGAAAATACT GGATATCATC 
AAAAGCCCGA TACTAACTCA CGAGCAAAAG GTTGCTTCAC TGACCAATAC TGCCGATTCT
CTGCTGGAAG TATTGGATTT GCCGCAGGGG CTGGACGAGC TGATGAATGT CCCGGCAGAC
AGAAAATGCA TCTGCGACCT GAATGAGGGA CACGCTCCGC TTCGTCCCCG ATATATCATT
CCCGACTATG CCAAATTCAT GAAGGAAGGC AGCCGGTTTC TGCAGCTTGC GCCACCGACC
GACTTATATG AAGCGCTTAA TTCTCTGCTG ATTTTCTACA AGCATGTTCC AAGCGTAACC
AACTTCCCGG TATATCTGGG ACAGTTGGAT ACGCTGCTGG AACCTTTTAT GCAAGACGTT
GACGACACTA CGGCCAAAAA ACTTCTGCGA GGCTTTTTGG TGCACGTGGA CCGTACTATT
CTTGACTCCT TCTCCCATGC AAATATCGGT CCCAAGCCCA CACGGACCGG CCGCTTGCTG
CTTGAGGTGG AGGCAGAGCT TACGCAGGCC GTTCCCAATC TGACCTTAAA ATACGAAGAA
GGCGTAACCG ATGACGACTT CGCCATTCAG GCTGTCAAGA CAGCCCTGCG TTCGGCCAAG
CCCAGCTTTG CCAACCACCG CATGTTTACG CAGGAACTTG GTGAGAATTA TGTCATTGCC
AGCTGCTATA ACGGATTGCC GCTGGGCGGC GGATCATACA CCCTTTGCCG CCTGATTTTG
GGCAACATTG CAAAACGCGC GGGCGGAATT GAAGATTTCA GGACCAACCA GCTGCCCTAT
GTTATGGACA TCATGGCACG TTACATGGAC TCCCGTATCC GCTTTGAAGT CGAAGAAAGC
GGCTTCTTTG AAAATAACTT CCTGGCCAGG GAAGGCTTTA TCAGCCGCAA ACGCTTCACT
GCCATGTTTG GCCTGGTGGG TCTGGCGGAA TGTGTAAATA TCCTGCTGGA AAAAGAGGGC
CGTCCCGGCC GCTTTGGCCA CGATGAGTAC GCTACCGAGC TTGGTGAATC CATCATCAAG
CAGATATATG AATTCAGTGA GAAACACCAT AACCCCTACT GCGAAATAAC CGGCGGTCAT
TTTCTGCTTC ATGCGCAAGT AGGAATTTCA GAAGATCAAA ATATCTCGCC GGGTACCCGT
ATCCCCATAG GAGAGGAACC CGACGAAATG ATTGATCACC TCATGGTTGT CAATCATTTC
CATAAATATT TTCCATCCGG AACGGGCGAC ATTTTCCCTA TTGATGTTAC TGTTCACCAA
AATCCCGAAT ACGTGCTGGA CATCGTCAAA GGCTCCTTCC GCAAGGAATT GCGCTATCTG
TCCTTCTATG AGAAGAACAG CGATGTTATC CGTATCACGG GCTACCTGGT CAAACGGTCG
GAAATCGAAA AGCTGAAAAG CGGTCAGAAT GTGCTGCAGG ACACCACCGC TTTGGGAATG
GGCGCCGTCA TGAATGGAAA GATTTTGGAT AGAAAGGTGC GCTGA
 
Protein sequence
MRDISMERVN ETRKKILDII KSPILTHEQK VASLTNTADS LLEVLDLPQG LDELMNVPAD 
RKCICDLNEG HAPLRPRYII PDYAKFMKEG SRFLQLAPPT DLYEALNSLL IFYKHVPSVT
NFPVYLGQLD TLLEPFMQDV DDTTAKKLLR GFLVHVDRTI LDSFSHANIG PKPTRTGRLL
LEVEAELTQA VPNLTLKYEE GVTDDDFAIQ AVKTALRSAK PSFANHRMFT QELGENYVIA
SCYNGLPLGG GSYTLCRLIL GNIAKRAGGI EDFRTNQLPY VMDIMARYMD SRIRFEVEES
GFFENNFLAR EGFISRKRFT AMFGLVGLAE CVNILLEKEG RPGRFGHDEY ATELGESIIK
QIYEFSEKHH NPYCEITGGH FLLHAQVGIS EDQNISPGTR IPIGEEPDEM IDHLMVVNHF
HKYFPSGTGD IFPIDVTVHQ NPEYVLDIVK GSFRKELRYL SFYEKNSDVI RITGYLVKRS
EIEKLKSGQN VLQDTTALGM GAVMNGKILD RKVR