Gene Cthe_1069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1069 
Symbol 
ID4811367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1276058 
End bp1276546 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content35% 
IMG OID640106491 
Producthypothetical protein 
Protein accessionYP_001037494 
Protein GI125973584 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.366774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATAT TCATTGAAAA CATACAGGAT AAAATTGAGA TTACGGATGA AATTCTTGAG 
CTTATGGAAA AAGCTATAAA AATGTGTCTT GAACATGAAA AGTTTGAGTA TCCTTATGAA
GTAAGTATAA TTCTTACGGA CAATGAAAAA ATAAGAGAGA TAAACTATGA GCAAAGAAAT
ATTGACAAAC CGACGGATGT TTTGTCATTT CCTATTGTAG ATATGTATGA CGGAGTGATA
AAATCAAGTC AGGGAGATTT TGATTTGGAC GAAGGACGAA TCATTTTGGG CGACATATTG
ATTTCCATGG AAAAGGCAAA AGAGCAATCC ATGGAATACG GGCATTCCTT TGAAAGGGAG
CTGATATTTT TGTTAACCCA TGGTGTTTTT CACCTTTTGG GCTATGACCA TGATACCCCG
GAGCGGGAGA AAAAAATGTT TGAAAAACAG GAAGCCATAC TAAAAAGCTT AAATCTTGAA
AGAAACTGA
 
Protein sequence
MEIFIENIQD KIEITDEILE LMEKAIKMCL EHEKFEYPYE VSIILTDNEK IREINYEQRN 
IDKPTDVLSF PIVDMYDGVI KSSQGDFDLD EGRIILGDIL ISMEKAKEQS MEYGHSFERE
LIFLLTHGVF HLLGYDHDTP EREKKMFEKQ EAILKSLNLE RN