Gene Cthe_1003 details

Gene Information

• Locus tag: Cthe_1003
• Symbol: frr
• ID: 4811297
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: -
• Start bp: 1200078
• End bp: 1200629
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640106421
• Product: ribosome recycling factor
• Protein accession: YP_001037428
• Protein GI: 125973518
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0233] Ribosome recycling factor
• TIGRFAM ID: [TIGR00496] ribosome recycling factor

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000000111257
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGAGT ATAAAAATAT TGAAGAAAAA ATGAAAAAAA CCGTGAGTGT ATTAAAAGAC 
GAGCTTAATA CTGTGAGGGC GGGAAGGGCA AATGCGGCAA TACTGGACAG GATAACGGTT 
GATTATTATG GTGTGCCGAC ACCGATTAAC CAGCTTGGTA CCATTTCAGT ACCGGAGCCA 
AGGGTTATAG TGATTCAACC TTGGGATGCC CAAATATTAA AGGAAATTGA AAAGGAAATT 
CAAAAATCCG ATATCGGTAT AAATCCGAAT AATGACGGCA AGGTCATTAG ATTAGTTTTC 
CCGCCGCTTA CCGAGGAAAG AAGAAAAGAA CTTACAAAGC TTGCGAAAAA ATATGGTGAG 
GACGCCAAAG TTGCCATAAG GTCAATAAGA AGAGACGGAA TTGAAAAAAA GAAAGCCATG 
AAAAAGAACG GCGAAATCAC CGAAGATGAT CTCAAGAGTG CGGAAAAGGA CATCCAAAAC 
CTTACAGACA AATATATTGC GGAAATAGAC AAATTAATTG AAATAAAAGA GAAGGAAATA 
CTAGAGGTTT AG 

 

Protein sequence

MDEYKNIEEK MKKTVSVLKD ELNTVRAGRA NAAILDRITV DYYGVPTPIN QLGTISVPEP 
RVIVIQPWDA QILKEIEKEI QKSDIGINPN NDGKVIRLVF PPLTEERRKE LTKLAKKYGE 
DAKVAIRSIR RDGIEKKKAM KKNGEITEDD LKSAEKDIQN LTDKYIAEID KLIEIKEKEI 
LEV