Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0755 |
Symbol | |
ID | 4810373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 920548 |
End bp | 921735 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640106172 |
Product | aspartate aminotransferase |
Protein accession | YP_001037183 |
Protein GI | 125973273 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGTTT CAAAAAAGGC GCTTTCTATT AGCCCGTCTT CCACGTTGGC TATAGATGCA AAAGCGAAAA AGATGAGGTC AGAAGGAATT GATATAATTG GATTCGGTGC AGGTGAACCC GACTTTGACA CACCTGATCA CATAAAAAAA GCGGCAATAG ATGCTATAAA TGCCGGGTTT ACCAAATACA CTCCGGCTTC AGGTACACTT GAGCTGAAAC AGGCTATTTG CCGGAAGTTT AAGAGAGACA ACGGGCTTGA TTACAATCCT TCAAATATTG TAATAAGCAA CGGTGCAAAG CATTCTCTGG TTAACGCTTT GCAGGCAATA TGCAATCCCG GCGATGAGGT AATTATTCCG ACTCCTGCAT GGGTAAGCTA TCCTGAGATG GTTAAGCTTG CAGACGGAGT GCCGGTTTAC ATTCATTGTT CCGAGGAAGA GGGCTTTAAA TTTACGATAG ATAAACTTGA AAAAGCTATT ACAGACAAAA CCAGAGCAAT AATTATCAAC AGCCCGAGCA ATCCTACGGG TATGATTTAC AGTGAAGAGG AATTAAGAGC TGTGGCCGAT TTGGCTGTGA GCAAAGGTAT ATATATCATA TCCGATGAAA TATACGAAAA GCTTATTTAT GACGGATACA AGCATGTGAG CATTGCATCC TTTAATGATA AAATTAAGGA CCTTACCATA GTTGTTAACG GTGTGTCCAA ATCTTATGCA ATGACAGGTT GGAGAATAGG ATATACTGCC AGCAACGAGC AAATTGCAAA AATTATGGCT AATGTACAGA GTCATGCCAC ATCAAATCCA AATTCAATAG CACAGAAAGC TGCATTGGCT GCCCTTGAAG GACCACAGGA GATAATCGAC GAGATGTCGG CAGAGTTTGT GAAGAGAAGA GATTACATGG TTGATAGGAT AAACTCAATG AACGGGGTAT CCTGTATAAA ACCAAACGGT GCTTTCTATG TAATGATGAA CATATCAAAG CTTATCGGAA AAGAAATAGC CGGCATGAAA ATAACCGGTT CCGACAGCTT TGCGGAAGCT CTGCTGGAAA AAGCAAATGT TGCTTTGGTT CCGGGTTCAG GTTTTGGAAC GGATATTCAC GTGAGGTTGT CTTATGCAAC TTCCATGGAG AATATTGTTG AAGGTTTGAA CAGGATAGAG AAGTTTTTGA GTATGTAA
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Protein sequence | MVVSKKALSI SPSSTLAIDA KAKKMRSEGI DIIGFGAGEP DFDTPDHIKK AAIDAINAGF TKYTPASGTL ELKQAICRKF KRDNGLDYNP SNIVISNGAK HSLVNALQAI CNPGDEVIIP TPAWVSYPEM VKLADGVPVY IHCSEEEGFK FTIDKLEKAI TDKTRAIIIN SPSNPTGMIY SEEELRAVAD LAVSKGIYII SDEIYEKLIY DGYKHVSIAS FNDKIKDLTI VVNGVSKSYA MTGWRIGYTA SNEQIAKIMA NVQSHATSNP NSIAQKAALA ALEGPQEIID EMSAEFVKRR DYMVDRINSM NGVSCIKPNG AFYVMMNISK LIGKEIAGMK ITGSDSFAEA LLEKANVALV PGSGFGTDIH VRLSYATSME NIVEGLNRIE KFLSM
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