| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0729 |
|---|
| Symbol | |
|---|
| ID | 4810347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 885954 |
|---|
| End bp | 887567 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640106146 |
|---|
| Product | cellulosome enzyme, dockerin type I |
|---|
| Protein accession | YP_001037157 |
|---|
| Protein GI | 125973247 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATGT TGAAAAAGTG TACAGGGTTT TTTCTATACG TACTTGTACT TCTCGTAAAT
ATAATATCTG TAAGTGCATT AGAGCCACCA CCGATATATG GCGACTCGAA TTCGGACTGC
AAGGTAAACT CAACGGACTT GACATTAATG AAAAGGTATC TTCTGCAGCA ATCCATTAGC
TATATCAACC TGATTAACGC TGATCTGAAT GGGGATGGTA AAATAAACTC GAGCGACTAC
ACATTGTTAA AAAGATATCT TTTGGGATAT ATTGATTCTT TCCCTGTGGA AAACCAGTAT
CCTACAACAC CTGAGCCTTC ACCGACACCT ACTCCCGCTG TTGATGAAGA AGCATGGAAA
AACAACACCG GTACAATTGA GTTGGGAGAT ACGATTAAAG TCAGCGGTGA AGGTATTTCG
GTAAACGGTT CGGTCGTTAC CATTACAGCC GGAGGAGACC ACTTAGTTAC AGGTACTTTA
AACAACGGCA TGATTTTTGT CAATACAACC GAAAGGGTTA AGCTGAGACT TAGCGGCGTA
AATATAAAAA ATCCAAACGG CCCTGCCATC TACTTCTACA ACGTTGACAA AGGCTTTATC
ACAATAGAAA AAGGTACGGT CAATTATCTC TCCGACGGCT CAACATATAC TGATCAGGAT
GCAAAAGCAG CTCTTTTCAG TAATGACGAT TTGGAGCTGA AGGGAAAAGG CACTCTCTAC
GTTACAGGTA ATTACAAGCA CGGTATTGCA AGTGACGATG ACCTTATTAT TGAAAACGGA
GATATTTACG TAACAGCAGT TACCGACGGA TTACACGCAA ACAGCGGCAT AGAAATCAAG
GGCGGAAACA TCACTGTTAC GGCAAAATCT GATGCCATTG AAAGCGAAAA AGATTTTGAA
ATGACCGGCG GTACCCTCAA TCTCACTGCA GATGACGATG CGATACACTC AGAAAAAGAC
CTTGTAATTG ACGATGGAGA AATAAATATA TTAAAATGTT ATGAGGGTAT TGAAAGCAAG
ACTACTATTA CAATTAACGG TGGCAAAATA AATATAAACT CAAATGAAGA CGGTCTAAAT
GCTGCAAGCG GCCTTTATAT CAATGGCGGT GAACTTTACA TAACTTCAGG ATATGATGGA
ATTGACTCCA ACGGACCTAT ATATATCAAT GGAGGATATA TTTTCTCCTT TGGAGGCAAC
ATTCCCGAAG GAGGTATTGA TTGTGACTGG AATCCTCTGA TAATCAATGG AGGAACCCTC
ATTGCAGCGG GAGGTTCCAA CAGTACTCCT TCAACTTCAA GTACTCAGTG CTCGGTGCTT
TTAGGCAGTG GAACGGCAAA CTCCGTTATC AGTATCCAAA GGAACGGGTC TGAAATAATC
AGCTTTACGG CTCCAAAGAA TTATCAAAAC ATGGTATTCA GTTCACCGGA TCTCGTATTG
AATGCAACTT ATGTTGTATA TAGAAACGGA GTCCAGTCGG TAACCTTTAC CACAAATTCA
ATTGTAACCA ACGCCGGAGG TAGTTCCGGA GGATGGTTCC CCGGAGGAGG ATTCCCAGGA
GGAGGATTCC CAGGAGGCGG TGGGGGATGG TTCCCAGGCG GCCCAGGATG GTAA
|
|---|
| Protein sequence | MRMLKKCTGF FLYVLVLLVN IISVSALEPP PIYGDSNSDC KVNSTDLTLM KRYLLQQSIS
YINLINADLN GDGKINSSDY TLLKRYLLGY IDSFPVENQY PTTPEPSPTP TPAVDEEAWK
NNTGTIELGD TIKVSGEGIS VNGSVVTITA GGDHLVTGTL NNGMIFVNTT ERVKLRLSGV
NIKNPNGPAI YFYNVDKGFI TIEKGTVNYL SDGSTYTDQD AKAALFSNDD LELKGKGTLY
VTGNYKHGIA SDDDLIIENG DIYVTAVTDG LHANSGIEIK GGNITVTAKS DAIESEKDFE
MTGGTLNLTA DDDAIHSEKD LVIDDGEINI LKCYEGIESK TTITINGGKI NINSNEDGLN
AASGLYINGG ELYITSGYDG IDSNGPIYIN GGYIFSFGGN IPEGGIDCDW NPLIINGGTL
IAAGGSNSTP STSSTQCSVL LGSGTANSVI SIQRNGSEII SFTAPKNYQN MVFSSPDLVL
NATYVVYRNG VQSVTFTTNS IVTNAGGSSG GWFPGGGFPG GGFPGGGGGW FPGGPGW
|
|---|
| |