Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0350 |
Symbol | |
ID | 4808499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 439924 |
End bp | 440505 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640105764 |
Product | signal peptidase I |
Protein accession | YP_001036781 |
Protein GI | 125972871 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.036626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAGA AAGGCATGAA TACAAATATG GACAATTTTG AAACTGCCGG CAATGGAAAC AGCAAAAAGC AAAAAGTTTT CAAAGAAATT GTCAGCTGGT CATTGTGTTT GCTGGGAGCC TTTATAATAG CTCTTTTGCT TACAAAGTAT GTTATTGTGA ATGCGTATGT TCCCACCGGC TCAATGGAAA ATACGATTAT GCCGGGAGAC AGGATTATTG CAAGCAGGAT CCATTATTAT TTTTCCGAGC CTAAAAGAGG AGATATTGTG GTGTTCCGAT ATCCGGACAA TGAAGAGGTG CTTTATGTAA AGAGGATTAT CGGGCTTCCG AATGAAACAG TGGAAATAAA GGACGGAAAT GTGTATATTA ACGGAAAGCT CCTTGAGGAA CCATATATTA AAGAAAAGGC ATACGGGGAT TTTGGACCTT ATGAAGTTCC AGAAGGCTGT TATTTTATGC TGGGGGACAA CAGAAACGGT TCCACGGATT CGAGAAGATG GACCAATAAA TATGTTAAAA AAGAAAAGAT TCTTGGAAAA GCTCTTTTTA AATATTTTCC TGGGTTTAAG ATTTTATGGT AA
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Protein sequence | MEQKGMNTNM DNFETAGNGN SKKQKVFKEI VSWSLCLLGA FIIALLLTKY VIVNAYVPTG SMENTIMPGD RIIASRIHYY FSEPKRGDIV VFRYPDNEEV LYVKRIIGLP NETVEIKDGN VYINGKLLEE PYIKEKAYGD FGPYEVPEGC YFMLGDNRNG STDSRRWTNK YVKKEKILGK ALFKYFPGFK ILW
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