Gene Cthe_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0319 
Symbol 
ID4808537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp402462 
End bp403106 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content41% 
IMG OID640105730 
Productclass II aldolase/adducin-like protein 
Protein accessionYP_001036750 
Protein GI125972840 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR00760] L-ribulose-5-phosphate 4-epimerase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.294023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGATG CTATTAGAGA ACAAATAGTG AAAGTAGCAA AGTTAATGTA TGAGAAAGGT 
ATGGTAAACG CTTTTGCCGG AAACCTTTCC GTTCGGGACG GCAACAATGT TTACATTACA
CCCAGCGGTA TATGCAAAGG TTTTTTAAAG GAAGACATGA TTGTGAAAAC CGATATGAAC
GGAAATATAC TGGAAGGGAT GTACAAGCCT TCGTCTGAAA TAAAACTTCA TCTCGAGGCA
TACAAGAAAA GGAAGGATAT ATATTCCGTG GTGCATGCCC ATCCTCCTTA TACCACTGCG
TACGCGGTTG CCAACAAACC TATTGAATCA AAAGCGTGTG CTGAAATGGT TATTTTTTTT
GGAAAGATAC CTCTTGCAGC ATACGGTACC CCGTCGACAG ATGAAATATT TAGCGGTGTC
GAAGAATATA TTAATGAGTA CGATGTTATC CTTCTTGCCA ATCACGGAAT AGTGTCTTTT
GGAAGAGATG TCTTTGATGC CTACTTTAAG CTTGAAGCGG CTGAGGATAT AGCTAAAACT
TTGATTTTAT CGCGCCTTCT CGGGGGAGAG AAAGACTTGC CGGAGAACAA ACTAAAGGAG
CTTGATGACA TGAGAAAAAA ACGTAGAACG GAAGTTTACT GGTAA
 
Protein sequence
MSDAIREQIV KVAKLMYEKG MVNAFAGNLS VRDGNNVYIT PSGICKGFLK EDMIVKTDMN 
GNILEGMYKP SSEIKLHLEA YKKRKDIYSV VHAHPPYTTA YAVANKPIES KACAEMVIFF
GKIPLAAYGT PSTDEIFSGV EEYINEYDVI LLANHGIVSF GRDVFDAYFK LEAAEDIAKT
LILSRLLGGE KDLPENKLKE LDDMRKKRRT EVYW