Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0319 |
Symbol | |
ID | 4808537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 402462 |
End bp | 403106 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640105730 |
Product | class II aldolase/adducin-like protein |
Protein accession | YP_001036750 |
Protein GI | 125972840 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.294023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGATG CTATTAGAGA ACAAATAGTG AAAGTAGCAA AGTTAATGTA TGAGAAAGGT ATGGTAAACG CTTTTGCCGG AAACCTTTCC GTTCGGGACG GCAACAATGT TTACATTACA CCCAGCGGTA TATGCAAAGG TTTTTTAAAG GAAGACATGA TTGTGAAAAC CGATATGAAC GGAAATATAC TGGAAGGGAT GTACAAGCCT TCGTCTGAAA TAAAACTTCA TCTCGAGGCA TACAAGAAAA GGAAGGATAT ATATTCCGTG GTGCATGCCC ATCCTCCTTA TACCACTGCG TACGCGGTTG CCAACAAACC TATTGAATCA AAAGCGTGTG CTGAAATGGT TATTTTTTTT GGAAAGATAC CTCTTGCAGC ATACGGTACC CCGTCGACAG ATGAAATATT TAGCGGTGTC GAAGAATATA TTAATGAGTA CGATGTTATC CTTCTTGCCA ATCACGGAAT AGTGTCTTTT GGAAGAGATG TCTTTGATGC CTACTTTAAG CTTGAAGCGG CTGAGGATAT AGCTAAAACT TTGATTTTAT CGCGCCTTCT CGGGGGAGAG AAAGACTTGC CGGAGAACAA ACTAAAGGAG CTTGATGACA TGAGAAAAAA ACGTAGAACG GAAGTTTACT GGTAA
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Protein sequence | MSDAIREQIV KVAKLMYEKG MVNAFAGNLS VRDGNNVYIT PSGICKGFLK EDMIVKTDMN GNILEGMYKP SSEIKLHLEA YKKRKDIYSV VHAHPPYTTA YAVANKPIES KACAEMVIFF GKIPLAAYGT PSTDEIFSGV EEYINEYDVI LLANHGIVSF GRDVFDAYFK LEAAEDIAKT LILSRLLGGE KDLPENKLKE LDDMRKKRRT EVYW
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