| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0162 |
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| Symbol | rpmA |
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| ID | 4808650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 201270 |
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| End bp | 201548 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640105573 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_001036596 |
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| Protein GI | 125972686 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000470304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAAGG CAAATTTGCA ATTGTTTGCC CACAAAAAAG GAGTGGGTAG TACAAGAAAC
GGTCGTGACA GTGAGTCGAA AAGACTTGGT GTAAAAAGAG GCGACGGTCA GTTTGTTAAG
GCCGGGAACA TTTTGGTTAG GCAGAGAGGT ACAAAAATAC ATCCCGGTTT GAATGTCGGA
AAAGGCAAGG ACGATACCCT CTTTGCTTTG GTAGACGGAA GAGTGAAGTT CTCAAGATTG
GGTAAAGACA GAAAACAGGT AAGTATTATT CCTGCATAA
|
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| Protein sequence | MIKANLQLFA HKKGVGSTRN GRDSESKRLG VKRGDGQFVK AGNILVRQRG TKIHPGLNVG
KGKDDTLFAL VDGRVKFSRL GKDRKQVSII PA
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