Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0089 |
Symbol | |
ID | 4808713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 122493 |
End bp | 123356 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640105498 |
Product | rod shape-determining protein MreC |
Protein accession | YP_001036523 |
Protein GI | 125972613 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGTTTTG TTAAAAACAA GCATTTTATA TTGCTGACGG TAACGGTGGC AATTTTGATT ATAATAGGGC TTTCTGCGAG AAAAAACAGC AAAATAAATA CTGTCAGCAA TGTTGTTACC GTTGCGTTAA GTCCCTTTCA GGAGTTTATT AATTATCTGG GAGACAGGGT AGAGGGGGCC GCTAAATATT TTCAGGATAT TGAGGCGTTA AGTCAGGAAA ATGAAGCGTT GAAGGTACGG ATTAGCGAGC TGGAAAAAGA AGTAAAAGAG CTTTCCGACT ACAGGGAAAA GAACAAAGAG CTTAAAGAGG CGTTAAATAT AAAGGACCAA TTCAGTGATG TGGAATTTCT TGGTGCGAAT ATTATTGCCA AGGATATGGG GAACTGGTTC CATACTTTTA CAATAGACCG GGGAATAGCC GATGGTGTTA CCGTTGATTC GGCCGTAATA ACAAAAGACG GACTTGTGGG AAGAGTGATA AGCACCGATC TTTTTACTTC CAAGGTAATT ACGATTATTG ACGAAGACAG TACGGTAAGT GCAAGAGTGT CCAAAACAAG GGATTTGGTT TTTGTCAAAG GTGATTTGCA GCTTAAAAAT CAGGGATTGT GCAGACTGGA CAATATTTTT CCCGACATGG ATATAGCGGT GGGAGATACG ATAGAGACTT CAGGATTGGG AGGCATATAT CCAAAAGGTA TTATTATAGG CAAAGTCAAG GAAGTCAGAC GTAAAACCAA TGATCTCAAC AGGTATGCAA TTATTGAGCC TGCCGTTGAT TTTAAACGGC TTGAAGAAGT GTTTGTGCTG GAAAGCAAAA ATAATAAAGA TAATTATGAA AAAGTAGGCG AAGACAACAA ATGA
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Protein sequence | MRFVKNKHFI LLTVTVAILI IIGLSARKNS KINTVSNVVT VALSPFQEFI NYLGDRVEGA AKYFQDIEAL SQENEALKVR ISELEKEVKE LSDYREKNKE LKEALNIKDQ FSDVEFLGAN IIAKDMGNWF HTFTIDRGIA DGVTVDSAVI TKDGLVGRVI STDLFTSKVI TIIDEDSTVS ARVSKTRDLV FVKGDLQLKN QGLCRLDNIF PDMDIAVGDT IETSGLGGIY PKGIIIGKVK EVRRKTNDLN RYAIIEPAVD FKRLEEVFVL ESKNNKDNYE KVGEDNK
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