| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1247 |
|---|
| Symbol | rps13p |
|---|
| ID | 4794911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1273296 |
|---|
| End bp | 1273748 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640099925 |
|---|
| Product | 30S ribosomal protein S13P |
|---|
| Protein accession | YP_001030683 |
|---|
| Protein GI | 124486067 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0099] Ribosomal protein S13 |
|---|
| TIGRFAM ID | [TIGR03629] archaeal ribosomal protein S13P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000201962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAAG AGTCAGAATT AAAATATTTT GTGCGGATCA TTAACACTGA TCTGGACGGT
ACCCAGCCCG TGCAGCTTGC GCTGACGGGA ATTAAGGGCA TCGGCCTCCA TGCCGCACTC
ATCATCGCAC GCCGTGCTGG CGTCGACACC CGTGCCACCA TGGGTCTCTT AGGCGATGAA
GATGTGGCCG CGATTGAAGA GCAGGTAAAA GCATACCCTG CCTCAGTGCC AAAATGGATG
GTCAACCGCC CGGTAGATGT GTACTCGGGA GAACCGAAAC ACCTCTACGG CAGCGACCTT
TCCCTTGCGA AGGAAGATGA CATCAACCTC ATGAAGAAGA TGCGGTGTTA CCGCGGTATC
CGTCATGAGA ATGGTCTCAA AGTTCGCGGA CAGCGTACGA AAGCAACCGG CAGATTCGGT
AAGATCGTCG GTGTCTCCAA GAGGCGGAAC TAA
|
|---|
| Protein sequence | MVEESELKYF VRIINTDLDG TQPVQLALTG IKGIGLHAAL IIARRAGVDT RATMGLLGDE
DVAAIEEQVK AYPASVPKWM VNRPVDVYSG EPKHLYGSDL SLAKEDDINL MKKMRCYRGI
RHENGLKVRG QRTKATGRFG KIVGVSKRRN
|
|---|
| |