| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0280 |
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| Symbol | secD |
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| ID | 4795394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanocorpusculum labreanum Z |
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| Kingdom | Archaea |
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| Replicon accession | NC_008942 |
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| Strand | + |
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| Start bp | 259523 |
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| End bp | 261016 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640098927 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_001029723 |
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| Protein GI | 124485107 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCA AGAAATCCCC CGCTCCGAAA AAAGCGAAGA AAGAATATTC CGGATGGCCG
GCAGTGATTC GTGATCCCCG GGTCATTCTC GTTCTTGTTC TGGTTGCCTT GTCGCTCGCG
GCGATCTTTG TGCCGTTCGG TGACCGGGAA GGTATTACGA ACCTGCAGTT TGGTCTCGAC
CTTGACGGTG GTTCATGGAT CCAGCTTGAG TTCCAGTCGG AAGTCGTTAC TATCGGTCAG
GGCGATGATG TGAATGCCGT GGCTGAAAGT GTTGGAAAAA CACTCGACTG TACGGTAATT
CCTATCAGTG CGACAAAGAT AGAGGTCCAG AAGTCGGCAA CAGTGGATGA ACTTCGTGCC
GCAGTGGAAG CTGCCGGAGG AACGTATGTC GGGTCTGAGC CGGGAGTCGG CGCGGATACG
GCCGCCACGA TCAAGCGGAT TCTTGAATCC AAGTTAAACA GCCTTGGAAC AAGTGATGTG
AAAGTCAACA CGCTCACGAA TATGGATGGT ATTTCCCAGT ATGTTCGTAT CGAGATGGCG
GGTGTTGATA TGAATACCGC CCAGGAACTT GTCGGGACAC AGGGTCTCTT CGAGCTTCGT
ATCGTTACAA CCGGAAATGA AACGGCCCAT GTCTTATACG GTGATTCGGT GGTATCAGTC
CAGACACCAA CCCAGAATCC GGCCGGTTCC GACAACTGGG GTGTTGCATT CAATATTGAT
AATGCCGGTG CCGAGGCCCT TCAGCAGGCC TGTATACAGT ATGGTGCCAC CACCAACCCT
GCAGATCATG AACTGGTCAT GTATCTTGAC GGGAACCTTG TCTACAGTGC TCCGCTTTCA
TCCGAGCTGG CAGCGTCAAT TGCCAAGAAT CCGGTGAACA AACTGTATGC CGGCACTGGT
CACGGTGACG AAGGGAAAGC CCAGGCACAG GAGCTTGAAA TCCATCTGCG TGCCGGTGCT
CTCCCAGTCC AGGTTCAGAT TGCCGGATCA GGTTCAACAT CCGCCGTCCT TGGGGACTAC
TTTAAGATCG TGTGTCTGAT TGCAGCAATA GCGGCCCTTG CGGCCGTGGC CTTAATGGTC
TATCTCAGAT ACCGGACTCC TGAAATCGTT CTCCCGATGA TCGCGACTAA TGTCTCCGAG
ATCATTATCC TTCTCGGTAT TGCCGTTTTC ATCCAGCAGC TTGATATCGC AGCCATCGCG
GCGTTGATTG CGGTTCTTGG AACGGGTATA GATCAACTGG TCATCATCAC CGACGAGGTC
ATGCATGAAG GCCGCGTTCC ATCACAGGCT CTTTATCTTA AACGGCTGAA ACGTGCTCTC
GTCATCATCA TGACTTCGGC CGCCACGGTC ATAATCGCCA TGTTCCCGCT GATTATCATG
GATCTTTCCA CACTCAAGGG ATTTGCCATC ATCAGTATCC TCGGTATCCT GATCGGTGTT
CTTCTTACAC GTCCTGCCTA TGGTAAGATT GTGATGGAGA TCATGGCAAA ATAA
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| Protein sequence | MSSKKSPAPK KAKKEYSGWP AVIRDPRVIL VLVLVALSLA AIFVPFGDRE GITNLQFGLD
LDGGSWIQLE FQSEVVTIGQ GDDVNAVAES VGKTLDCTVI PISATKIEVQ KSATVDELRA
AVEAAGGTYV GSEPGVGADT AATIKRILES KLNSLGTSDV KVNTLTNMDG ISQYVRIEMA
GVDMNTAQEL VGTQGLFELR IVTTGNETAH VLYGDSVVSV QTPTQNPAGS DNWGVAFNID
NAGAEALQQA CIQYGATTNP ADHELVMYLD GNLVYSAPLS SELAASIAKN PVNKLYAGTG
HGDEGKAQAQ ELEIHLRAGA LPVQVQIAGS GSTSAVLGDY FKIVCLIAAI AALAAVALMV
YLRYRTPEIV LPMIATNVSE IIILLGIAVF IQQLDIAAIA ALIAVLGTGI DQLVIITDEV
MHEGRVPSQA LYLKRLKRAL VIIMTSAATV IIAMFPLIIM DLSTLKGFAI ISILGILIGV
LLTRPAYGKI VMEIMAK
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