Gene Mlab_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0056 
Symbol 
ID4794644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp56903 
End bp58087 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content55% 
IMG OID640098701 
Productaconitase subunit 1 
Protein accessionYP_001029501 
Protein GI124484885 
COG category[S] Function unknown 
COG ID[COG1679] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00973129 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACTAG ACAAATATGA TCAGGCGCTG CTGAACGGAG AATACGGCGA AACCAAACAA 
AAAATGATGG AGATCCTCCT CGCTCTCGGA AAAATCTACG AGGCGGAGAA GTTCATCGAA
GTTAAAAGCG TTCAGGTATC CGGCGCCTCG TTTAAAACGA TCGGGGACGC GGGGCTCTCA
TGGCTCAACA CCCTGTCTGG AAAAGCGGTT GTCCCGTCAT TTTTAAACCC GATCGGCATG
CCGCGTGACG AATGGCAGAA TCTTGGCATC CCGGACGATT TTGCGAAAAA ACAGCTGGAG
GTCAACGCCG CATATACCCG GCTCGGGATC CGGCCGACCT GCACCTGCAC GCCGTACTAC
TTCAACATCA TCGAACGGGG AGACCATCTC GCATGGTCGG AGTCCTCGGC GGTCAGCTAC
GTGAACTCCG TTCTCGGAGC AAGAACAAAC CGTGAAGGAG GGCCTTCGGC TCTCGCGTCT
GCCCTTACCG GAAAGACCCC ATATTACGGT CTGCACATCG TCAGGAACCG AATCCCGCAG
ATCGAGTTCC ACATCGACGA TCCGGCGGCG ACGAAATCCT GGACCAATGC CCATTACGGG
GCTCTCGGGA TCATCGCCGG AGCAATCTCC GGAAACAGGA TCCCGTTTTT CACCGAGCTT
CGTCCCAACC GTGATATGCT CAAAAGTCTG GGAGCCGCCA TGGCCGCAAG CGGAGCAGTC
GCTTTGTACC ATGTAAACGA GATCACCCCG GAGACCCGGT TCCCCTTCTT CAAAAAACAT
ATCGAAGAGG ATGACCGCGA AGTCGTCGAG ATCGAAGTGT CCGAGATCGA CGAGCTGTTC
GGCAGTCTGG AAGCAGATGT CGTAGCTCTT GGATGTCCCC ATGTCTCCGA GGAAGAGTTG
GAAGAACTGG CCTTCCTTCT GGAAAACAGA CGGGTCGTGA TGCCGTTCTA CATCTTCGCT
GCAGAGGAGA TGAAAGCAAA ACACCCGGAT CTTTGTGCAA AGATCCAAAA CAGCGGCGCA
AAAATCGTAC CCGACACCTG CATGGTCGTC TCGCCGCTGA TGGACAGAGC CGGAGTCGTC
ATGACGAACT CCGGAAAAGC ATTCACGTAT CTCCCGGGAA TGTGCAAAGC GACGCCGCTT
TTAGGCACTC TCGAGGATTG TGTCCGTGCA GGATGTGGTG AATAA
 
Protein sequence
MELDKYDQAL LNGEYGETKQ KMMEILLALG KIYEAEKFIE VKSVQVSGAS FKTIGDAGLS 
WLNTLSGKAV VPSFLNPIGM PRDEWQNLGI PDDFAKKQLE VNAAYTRLGI RPTCTCTPYY
FNIIERGDHL AWSESSAVSY VNSVLGARTN REGGPSALAS ALTGKTPYYG LHIVRNRIPQ
IEFHIDDPAA TKSWTNAHYG ALGIIAGAIS GNRIPFFTEL RPNRDMLKSL GAAMAASGAV
ALYHVNEITP ETRFPFFKKH IEEDDREVVE IEVSEIDELF GSLEADVVAL GCPHVSEEEL
EELAFLLENR RVVMPFYIFA AEEMKAKHPD LCAKIQNSGA KIVPDTCMVV SPLMDRAGVV
MTNSGKAFTY LPGMCKATPL LGTLEDCVRA GCGE