| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3770 |
|---|
| Symbol | |
|---|
| ID | 4785999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3988094 |
|---|
| End bp | 3989332 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640092353 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_001022958 |
|---|
| Protein GI | 124268954 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0248886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCTCAG CCGAGTCGCC GGCGACGGTG ACCCTGGCGG ACGTCGAGGC CGCTGCACGC
CGGCTGGCCG GACAGGTGCT CGACACACCG TGTGTCGAGT CGAAGACGCT GTCCGAGATC
ACCGGCGCGC AGGTCTTCCT GAAGTTCGAG AACCTGCAGT TCACCGCTTC CTTCAAGGAG
CGCGGCGCGT TGAACAAGCT GCTGGCGCTG GTCGCCGCGC GCGACGACGG CACCGCCGCG
TTGAAGGGCG TGATCGCCGC CTCCGCCGGC AACCATGCGC AGGGCGTGGC GCATCACGCG
CAGCGGCTGG GCCTGCGCGC GGTCATCGTG ATGCCCCGGC ACACGCCGAC GGTGAAGGTC
GAGCGCACGC GCGGCTTCGG TGCCGAGGTG CTGCTGCACG GCGAGAGCTT CGACGAGGCT
CGCGCGCACG CGCTGGAGGT GGCCGCGGCG CAGGGCCTGA GCTTCGTGCA CCCCTTCGAC
GATCCGCTGG TGATCGCCGG CCAGGGCACG ATCGGCCTGG AGATGCTGCG CGCGCAACCG
ACGCTCGACA CTCTGGTCAT CGCCGTCGGC GGCGGCGGGC TGATCTCCGG CATCGCGACC
GTCGCCCGGG CGCTGAAGCC CGGGCTGGAG ATCGTCGGGG TGCAGACGGC GCGCTTTCCG
GCGATGGTGA ACCTCGTCAA GGGCCGCACC CATCCGCAAG GCACCAGCAC GATCGCCGAG
GGCATTGCCG TCGGTGAGCC GGGGCGGATC ACGCGGGCGA TCGTTCGCGA CCTCGTCGAC
GACATGGTGC TGGTGGACGA AGCGGACATC GAGCATGCCC TGGTGATGCT GCTGGAGATC
GAGAAGACGC TGGTCGAGGG GGCCGGCGCC GCGGGTCTGG CTGCGCTGCT GAAGGCGCCC
GGGCGCTACG CCGGGCGACG CGTGGGCCTG GTGCTGTGCG GCGGCAACAT CGATCCGCTG
CTGCTGTCGG CGATCATCGA GCGCGGCATG GTGCGGGCGG GGCGGCTGGC ACGCATCCGC
GTCGACGCGC GCGACGCCCC CGGCGCGCTG GCGCGCATCA CCGCCACCGT GGCCGAGGCC
GGCGCGAACA TCGAGGAAGT GCATCACCAG CGGGCCTTCA CCACGCTGTC GGCGCAGAAC
GCCGAGGTGG AGTTGGTGTT GCAGACGCGC AATCACGCCC ATATCGGCGC AGTGATCGCG
TCCCTGGTGG CTCAGGGGTT CGAGGCCAAG GCCTACTGA
|
|---|
| Protein sequence | MTSAESPATV TLADVEAAAR RLAGQVLDTP CVESKTLSEI TGAQVFLKFE NLQFTASFKE
RGALNKLLAL VAARDDGTAA LKGVIAASAG NHAQGVAHHA QRLGLRAVIV MPRHTPTVKV
ERTRGFGAEV LLHGESFDEA RAHALEVAAA QGLSFVHPFD DPLVIAGQGT IGLEMLRAQP
TLDTLVIAVG GGGLISGIAT VARALKPGLE IVGVQTARFP AMVNLVKGRT HPQGTSTIAE
GIAVGEPGRI TRAIVRDLVD DMVLVDEADI EHALVMLLEI EKTLVEGAGA AGLAALLKAP
GRYAGRRVGL VLCGGNIDPL LLSAIIERGM VRAGRLARIR VDARDAPGAL ARITATVAEA
GANIEEVHHQ RAFTTLSAQN AEVELVLQTR NHAHIGAVIA SLVAQGFEAK AY
|
|---|
| |