| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3140 |
|---|
| Symbol | |
|---|
| ID | 4786594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3340601 |
|---|
| End bp | 3341611 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640091711 |
|---|
| Product | putative ATPase |
|---|
| Protein accession | YP_001022328 |
|---|
| Protein GI | 124268324 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000223512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCCA CCGCCACAGA ACTCGTGACC GTGCCGACCG GGCTGCCGCG ATCAGGCTTG
CCCATCGCCC ACATGCGCAG CGTCTACCGC CTCGGTGACG TTGAGCGCCG GCTCGAGAAG
CTGCCACCCA AGGAACACGA GAGCCTGCGT GCCACCTACG AACGCATGCT CGAAAAGGGC
GCGGAGCGCT TCCAGGTCAA GCCCTCGGGC GTGCCGGCGA TGGATCATCT CTACGAGCAA
CTGCCCAATT TCCACGACGT GCTCGACGAC GTGAAGCGCC AGCTGGCGCT GTGCCACGAC
AGCCGCGACG CGCTCGAGAT CACGCCGATG CTGCTGTTGG GTCCCCCGGG TGTCGGCAAG
ACCCATTTCG CGCGCGAGAT GGCGCAGTTG CTCGGCACCG GCCTGGGCTT CCTGTCGATG
AGTTCCCTGA CAGCCGGCTG GGTGCTCAGC GGCGCCTCCA GCCAGTGGAA GGGTGCGCGG
CCCGGCAAGG TGTTCGAGAC CCTGGTCGAC GGTCAGTACG CCAACCCGGT GATGGTGGTG
GACGAGATCG ACAAGACCGG TGGCGAGCAC GCTTACGACC CGCTGGGCGC GCTGTACGGC
CTGCTGGAGC ACGACACCGC CGGCAGCTTC ACCGACGAGT TCGCGGAGGT CGCGATCGAC
GCCAGCCAGG TGATCTGGGT CGCCACCGCC AACGATGCAC GGGCGATTCC CGAGCCCATC
CTGAACCGCA TGAACGTGTT CGAGGTGCAG ATGCCCGATG CCGCCGCGGC GCGTGCGATC
GCTGCGCGCC TGTACCGCGG CATCCGCGCC GACCATGACT GGGGCAGCCG CTTCGCGCCG
GAGCCCGGCG ACGACGTGCT CGATGCGATG GCCGAGCTGG CGCCGCGCGA GATGCGGCGC
GCCTGGATGA CGGCCTTCGG CAACGCCAAG CTCGCCGGCC GTGCGGCGGT CGAGCCGCGC
GATCTGCCGG AAGCGCACGG CCGGAAGGCC GCCATCGGCT TCATGCAGTA G
|
|---|
| Protein sequence | MPSTATELVT VPTGLPRSGL PIAHMRSVYR LGDVERRLEK LPPKEHESLR ATYERMLEKG
AERFQVKPSG VPAMDHLYEQ LPNFHDVLDD VKRQLALCHD SRDALEITPM LLLGPPGVGK
THFAREMAQL LGTGLGFLSM SSLTAGWVLS GASSQWKGAR PGKVFETLVD GQYANPVMVV
DEIDKTGGEH AYDPLGALYG LLEHDTAGSF TDEFAEVAID ASQVIWVATA NDARAIPEPI
LNRMNVFEVQ MPDAAAARAI AARLYRGIRA DHDWGSRFAP EPGDDVLDAM AELAPREMRR
AWMTAFGNAK LAGRAAVEPR DLPEAHGRKA AIGFMQ
|
|---|
| |