| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0812 |
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| Symbol | |
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| ID | 4784496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 852540 |
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| End bp | 855467 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640089373 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001020009 |
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| Protein GI | 124266005 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.817585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATA TCAACCGCCA GCTTTTTGCC GCCTCTGATT CGCTCTGCGT TCGCGATGTC
ACATTGCGCG CCACGGACGA TGTGCAGACT CACCGCGAGA AGCTCGCCCG TATCGTGCTC
GACGAACTCT ACGAATTTGT CGGCCTGCTC GATGCCCACG GAACGACGCT CGAGATCAAT
CGTGCAGCAC TGGAAGGTGC CGGCATCGCG CTCGACGACA TCCAAGGCAG ACCGTTCTGG
GAGGCACGCT GGTGGGCAAC CTCTCCCGAG GTTCGGAGGG AGCAACGTGA GGTCATCCGC
CGAGCTGGCG AAGGCGAGTT CGTTCGCCGT GATTTCGAGA TCTATGGGCA ACAAGGTGGT
CAGGAGACGA TCCTGATCGA CTATTCCTTG CTGCCCATCC GAGACAACTC CGGGAAGATC
GTGTTCCTGT TGCCAGAAGG CAGAAATATC ACAGACAAGA AGCGCGCCGA AGCGGAGATA
GCGCGCAAGA ACCGCGAACT GCAAAGATTG CTCGACAAGA TCCAGCGTCT CGACGATGCC
AAGAGCGACT TCTTCGCGAA CGTCAGCCAC GAACTGCGGA CTCCGCTCGC GCTGATACTC
GGCCCGTCAG AGTCGCTACT CGCAACAAGC GAAGGGCTCA GCGACGCTCA GCGGCGCGAT
CTTCGGGTCA TCCAGCGCAA TGCGGCGATG CTGATGAAGC ATGTCAACGA CCTTCTGGAT
CTGGCGAAGT TCGATGCCGG AAAGATGGCG CTTCGTTATA CCCGCGTCGA CCTGGCTGCG
GAGGTTCGCA CTCTTGCCGC GCACTTCGAG GCCGTCGCGG CGGAGCGCTC GTTGTCTTAC
GTTGTTCAGG CTCCCGCGGC GCTGGAAGTC GAGGTCGACC AACAGATGTT CGAACGGATC
CTGCTCAATC TGCTGTCGAA CGCATTCAAG TTCACACCGG ATTTCGGCCG TATCCGCTGC
TCCCTCGAAG CCAACCCGGA CCACAGCATC CAGCTTGTCG TCGAGGACAG TGGATGCGGC
GTCAGGGCCG ATCTGCGAGA GGAGATCTTC GAGCGATTTC ATCAGGCGCA GAGTGGAACC
ACGCGAAGCT TCAGCGGGAC CGGTCTCGGC CTGGCCATTG CCAAGGAGTT CGTGGACCTT
CACACCGGAA CGATCTCGGT TTCCGATGCC ATCGGCGGAG GTGCACAGTT TCGAGTCGAG
CTCCCTTCGC GAGCGCCATT GGGCGCTTAC ATCAGGTCCG TCGACTCGCC CCTCGGGAAC
CGAAATCGCG GACAGATCGT CGGAACCATA GAGGAGCTGC AGCGGGCCGA GTTCGATGCC
GTCTCGGATC TGTCTGGATC AGAAAAGCCT CTCGTGCTGG TCGCCGAGGA CAACGCCGAC
ATGAGGCGCT TTATCGTCGA GGTCCTCTCC AGCGATTTCA GGGTCGTACA CGCTGCAGAC
GGCTTGCAAG CGCTCACCCA GGCCCGGGCG CAGGCGCCCG ATGCCATCAT CACAGATCTG
ATGATGCCGA AGCTCGGCGG CGACAAGCTG GTGTCGGAGC TCCGGTCGAC TCCAGAACTC
GCGCATATTC CCGTTCTCGT GTTGTCAGCC AAGGCGGATG AGTCCCTTCG CCTGAAGCTG
CTCTCCGACT CCGTCCAGGA CTACATCGTC AAGCCATTTT CATCGCGCGA GTTGCTCGTT
CGAGTACGAA ACATCGTCAC GATGAAGCTG GCCCGCGAGG CGCTGCAGAA GGAGCTGGCG
TCGCAGAACG AGGATCTTGC TCAGTTGACG CAGCAACTCA TTGCGAGCAA GCAGGGGCTT
CAACGGAGCC ACGATGCATT GAAGGAATCA GAGCGGCGCT GGCGGGCTGT CTACGAAAAC
ACCGCCGTCG GCGTATCACT GAGCGACCTA CAGGGAAACA TGCACGCTGC AAATCCCGCG
CTCCAGGAGA TGCTGGGATA CACCGAAAGT GAGCTGATCG GTCTCGGCAA CCTGATGACA
GATGCCGAAG CAGGCCATGA GGATCGTCGC CTTCAACTCG AACGGCTCGT CAACGGCAGC
CAGGTAGAGA TGCGACAGCA AAGGAGGTAC CGGCATCGCA ATGGCATGAC GATCCTGGCG
AACGTTCGTG AATCGCTCAT TCCCGGCACC TCGGACCTGC CTCCCACATT GATCACGGTT
GTCGAGGACA TCACAACGCA GAAGCGCGCG GAGGTGGAAC TCGCTCAGAC CAAGGATGCG
CTCGCACGGG TTTCGCGGGT GACAACGATG GGTGAACTCG CAGCTTCGAT TGCGCATGAA
GTCAACCAGC CCCTCACGGC CGTCGTTGTC AACGGCCACG CCTGCCTGCG CTGGCTCTCG
ACGGAACCAC GAAACGATCT CGAAGTTCAG GATGCGATAC AGCGGATCGT TCGAGATGCC
AATCGGGCCA GCGAGGTTAT CGCCAGGATC AGGGGTTTCC TCAAGCGGAG CAAGACAGAT
CGAACCATGG TCTGCATGGA CAACGTCGTT GAAGATGTCA TAGGCCTGGC GCGTGATTCG
CTCAGATCCG CTGGCGTCCA GTTGATCAAG CACGTCGACT CCGATCTGCC TCGCGTGTTC
GCGGACAGCG TCCAGCTCCA GCAGGTGATC CTCAATCTGA TGATGAATGG CATCGAGGCC
ATGGGCTCCT GCGCGACACT TGAGCGTCAG CTGGAGCTGC GCGTCGTGAA GCACGGTGGA
GATATCGATG TTTCGGTCAG CGACTCAGGG ACAGGACTGG TGACTGCTGA TTTCGAGCGG
ATATTCGAAG CGTTCTACAC CACCAAGCCC GACGGCATGG GTATGGGACT GGCGATTTGC
CGATCCATCG TCGAGGCACA TGGTGGACGG TTGTGGGCCC AGGCGAACAA GACGCAAGGA
TTGACGCTGC AGTTCCGTCT GCCGATCGCA GAGCACGCCG AACCATGA
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| Protein sequence | MPNINRQLFA ASDSLCVRDV TLRATDDVQT HREKLARIVL DELYEFVGLL DAHGTTLEIN
RAALEGAGIA LDDIQGRPFW EARWWATSPE VRREQREVIR RAGEGEFVRR DFEIYGQQGG
QETILIDYSL LPIRDNSGKI VFLLPEGRNI TDKKRAEAEI ARKNRELQRL LDKIQRLDDA
KSDFFANVSH ELRTPLALIL GPSESLLATS EGLSDAQRRD LRVIQRNAAM LMKHVNDLLD
LAKFDAGKMA LRYTRVDLAA EVRTLAAHFE AVAAERSLSY VVQAPAALEV EVDQQMFERI
LLNLLSNAFK FTPDFGRIRC SLEANPDHSI QLVVEDSGCG VRADLREEIF ERFHQAQSGT
TRSFSGTGLG LAIAKEFVDL HTGTISVSDA IGGGAQFRVE LPSRAPLGAY IRSVDSPLGN
RNRGQIVGTI EELQRAEFDA VSDLSGSEKP LVLVAEDNAD MRRFIVEVLS SDFRVVHAAD
GLQALTQARA QAPDAIITDL MMPKLGGDKL VSELRSTPEL AHIPVLVLSA KADESLRLKL
LSDSVQDYIV KPFSSRELLV RVRNIVTMKL AREALQKELA SQNEDLAQLT QQLIASKQGL
QRSHDALKES ERRWRAVYEN TAVGVSLSDL QGNMHAANPA LQEMLGYTES ELIGLGNLMT
DAEAGHEDRR LQLERLVNGS QVEMRQQRRY RHRNGMTILA NVRESLIPGT SDLPPTLITV
VEDITTQKRA EVELAQTKDA LARVSRVTTM GELAASIAHE VNQPLTAVVV NGHACLRWLS
TEPRNDLEVQ DAIQRIVRDA NRASEVIARI RGFLKRSKTD RTMVCMDNVV EDVIGLARDS
LRSAGVQLIK HVDSDLPRVF ADSVQLQQVI LNLMMNGIEA MGSCATLERQ LELRVVKHGG
DIDVSVSDSG TGLVTADFER IFEAFYTTKP DGMGMGLAIC RSIVEAHGGR LWAQANKTQG
LTLQFRLPIA EHAEP
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