Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0063 |
Symbol | rfaL |
ID | 4783820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 58085 |
End bp | 59680 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640088610 |
Product | O-antigen polymerase |
Protein accession | YP_001019260 |
Protein GI | 124265256 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0639643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTGCTT CATCATGCGG TTCGGCACCG CCGTTGAACG GGGAGCATCA AGCAGCACGA TGGGCCGCAA CTCTGGCGTT CGTTGTTTGC ATCGTGTATT CCCTAGCGAG ATTTGATGAC GGTCAGGGCG GACCGTCGCT GGTGTTACTC GCAGCAAGCG TAGCGCTGTT GGTCGCAAGC GGCAACGCCG GCCCGTGCAG TGCGCCGGCG ATGGCCTGGG CCTGGTGGAT CGCTGGAATG GCCTGCGTGG CCGTGGCACT GGTGCAGTAC TTTGCCCCGT CGCTGGCCAA TGGCTGGCTG GTCGCCAACC CCGGTGCTGC CGGTCGCGCC GTCGGCAACA TGCGCCAACC CAACCATCTG GCCACCGCCC TGTTGTGCGC GATGGTCATG ACTGCGTGGC TTTGGCAGGC GGGTCGCCTG CGCGCGCCCT GGGCCGTCGC CTCGCTCTTC GCCATGGTGC TGGCGGTGGC GCTTAGCGCC TCGCGGACCG GCGCGCTTTC GGTCGGCGTG CTGCTGCTGT GGGCCGCGGT CGATCGCACA CTGCCGCGCG CCGCCCGATG GACGCTCGCG CTGACGCCCG TGGTCTATCT CTTCTGCTGG GCCGGCCTGG CGGAGTACGC CGAGTGGCAG CAGGCCCATT TCTACGGCGC CGAACGACTG CAGTCACACA GCGACATCAG CAGCTCCCGC TTCGCGATCT GGCGCAATGC GTTGACGCTG ATCGCACAGA ACCCGTGGAC CGGCGTCGGC TGGGGCAACT TCAACTTCGC GTGGACCTTC ACGCCCTTCC CGGACCGGCC GGTCGCGTTC TTCGACCACA CGCACAACCT GCCGCTGCAG CTCGCGGTCG AGATCGGCCT GCCGGCCACG GCCTTGGTGC TGGGACTGTT CGGATGGGCC CTGTGGCGCG CACGCGGCGC GTGGCGGGTG GCGGGCGAAC AGCCGGGCCA TCCGGCGCGC GCGGCTTTCG TGATGCTGGT GGTGCTGGGG GTGCACAGCC TGCTCGAGTA CCCGCTGTGG TATGCCTACT TCCTGCTGCC GGCAGCCTGG GCGCTGGGTG TGTTTCTCGG GTCGGCGCCG ACGAAGGAGC CTGCCTCCGA TCTGAATGAG CCGGCGAGTC CGGCGGTCGC CATCATGGCG CGGTGGTCGA CGTTCCTTCT GCGTGCGGCC GGTGCACTGA TGATCGTCGG CGCCGCGTAT GCCGCCTGGG ATCACCGCCG CGTCGAGGTG ATCTTCGCGC CGCCGGCCGG CGCCGGCCCG TTGGCGGAAC GCATCGCCGC CGGACGCGAG AGCGTGCTGT TCGGCTATCA CGCCGACTAC GCCGCCGTGA CCAACGAGCC GAAGGATCAG GCGCTTGCAA GCTTTCGCCG TCCGCTGCAC CACCTGGTCG ATGTGCGTCT GCTCATCGCG TACGTCGAGG CGCTGAAGGC CAATGGTCGC GATGCCGAGG CGCTGTACGC AGCCCAGCGA TTGCGAGAAT TTCGGCGCGA AGACGCGCAG GCCTACTTCA AGAATTGCAC GGCCGACAAC CCGGTGCCGC CCTTCCAGTG CCGAACCGAT CCGGTAGCGC TGACCTGGCG CGACCTGGAG CCTTGA
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Protein sequence | MIASSCGSAP PLNGEHQAAR WAATLAFVVC IVYSLARFDD GQGGPSLVLL AASVALLVAS GNAGPCSAPA MAWAWWIAGM ACVAVALVQY FAPSLANGWL VANPGAAGRA VGNMRQPNHL ATALLCAMVM TAWLWQAGRL RAPWAVASLF AMVLAVALSA SRTGALSVGV LLLWAAVDRT LPRAARWTLA LTPVVYLFCW AGLAEYAEWQ QAHFYGAERL QSHSDISSSR FAIWRNALTL IAQNPWTGVG WGNFNFAWTF TPFPDRPVAF FDHTHNLPLQ LAVEIGLPAT ALVLGLFGWA LWRARGAWRV AGEQPGHPAR AAFVMLVVLG VHSLLEYPLW YAYFLLPAAW ALGVFLGSAP TKEPASDLNE PASPAVAIMA RWSTFLLRAA GALMIVGAAY AAWDHRRVEV IFAPPAGAGP LAERIAAGRE SVLFGYHADY AAVTNEPKDQ ALASFRRPLH HLVDVRLLIA YVEALKANGR DAEALYAAQR LREFRREDAQ AYFKNCTADN PVPPFQCRTD PVALTWRDLE P
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