Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_30201 |
Symbol | recN |
ID | 4776559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 2677081 |
End bp | 2678769 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640088544 |
Product | DNA repair protein RecN, ABC transporter |
Protein accession | YP_001019015 |
Protein GI | 124024708 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.15425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTAATTG GTCTTCGACT TCAAAACATT GCTTTGATCG ACAGCCTGGA TCTGTGCTTT GATCAAGGTT TTACGGTGCT TACGGGAGAA ACAGGAGCGG GAAAATCGAT CCTGTTTGAG GCATTGGATG CTCTTTTGGG AGGAGCGCAA GGAACGGCGG GAGTTCGCTT ACTTAGTTTT GGTGAGGAGC GTGGTCAGAT TGAGGCAAGT TTCGCGCTTG ATTCAGCAGT AGAACATTGG CTTAAGGATC AGGAGTTTGA TTCAGAAGAT GCGGAACTGG TCCTTTGTAG GGAGTGGCGT CGTCAGGACA ATCGAGTTAG CAGTCGTTTT CGACTCAATG GGGTGACGGT CAATCGGCAG CAGATTCTCA CTTTGCGACC GTTGTTGATT GATCTCACTG TGCAGGGTCA GGCTCAGCAA TTAGCGAGAC CTGGTCAGCA GCGTTGGTGG TTGGATCGTT TTGGTGGTGT TGTTTTGGAA CGTGCTCTTT TGCAAGTGAA GCAAAGCTGG TCTGATTGGC AACAGAACTC TTTAAGGCTT GAGCAGGCTC AAGCCAACTG GCAGCAGTTG CAACGGCAGA GACAGGAGGA GGAAATGCAG CTTGAGGAAC TGGAGCTTGC TCAGTTAGAC GATTGCTGCG AAGACAAGAC TCTTGAGAGG GAGCAGGATC GACTTGTTCA TGGCGTGAGG TTGCAGGAGG GCTTAGGTGT ATTGATCGGT CGGTTGAAAC TGGGTGCTGA TCAAGTGCCG TCTGTTCTGG ATCATTTGGC TGCCTGTGTT CATCAACTTC AGGCAATGTC TTTGCTGGAT TCTTCTTTGG TCACTCAGCT GGATCAGTGT CTCGATTTTG AGGCCGGTTT GCAGGATTTG ATTCATCAGC TTGAGCATTA CGGTTCTGTT TTGGAGAGTG ATCCAGAACG TCTTGGTCAG TTGCAGGAAC GGCTCGCGTT TTTGAAGCGA TTGGAGAGAC GTTTTGGTTT GGATTTGCCG CAGATGCTGG TTCGTCGGGA TGAATTGAGG AATCATTTGG CAGTCGGTGG GGCAGAAGCT GCTTTAGAGA AGTTGAAGAA AGAGGAGGAA AATGCCCGGA ATTGTATGGA TCGAGCGAAT CAGTCTCTAA CAGTTGTTAG GGAGAAAACG GCGCGCCAAT TAGAGCAGAA GTTGATGACA TATTTGCGTC CGATGGGTCT GGAGAATGTG CGTTTTAAGG TTCAGCTCAA CTCGGCTATG CCTAGTGAAA ATGGTGCGGA TGCTGTTCAA TTTCTTTTTT CCGCTAATCC TGGCCAGCCG TTAGCTCCTC TTGCTGAAGT GGCGTCGGGT GGTGAGATGT CTCGTTTTTT GCTTGCCCTT AAAACAACCC TCAGTGCAGT GGATGGACGG AGCACCTTGC TGTTTGATGA GATTGATGCA GGAGTAAGTG GTCGGCTGAG TGGCGAGATT GCCAGTCTTC TAAAGGATCT AGCTCTTCAT CGACAAGTCT TTTGTGTTAC CCATCAACCA TTGGTGGCGG CAGCTGCAGA CCATCATTTC CGTGTCAGCA AGTTAGTTGA GCAGGGCTTG ACACGATCGC GAGTGTCCCA ACTGAGGGAC ACTCAGTCTC GAATGCAGGA ATTGGCGGAT TTGGCTGGCG GGGATTTGGC TGAGGCGCGG GCCTATGCGG CCAGCTTGCT GGACCATCAA GTGGCCTAA
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Protein sequence | MLIGLRLQNI ALIDSLDLCF DQGFTVLTGE TGAGKSILFE ALDALLGGAQ GTAGVRLLSF GEERGQIEAS FALDSAVEHW LKDQEFDSED AELVLCREWR RQDNRVSSRF RLNGVTVNRQ QILTLRPLLI DLTVQGQAQQ LARPGQQRWW LDRFGGVVLE RALLQVKQSW SDWQQNSLRL EQAQANWQQL QRQRQEEEMQ LEELELAQLD DCCEDKTLER EQDRLVHGVR LQEGLGVLIG RLKLGADQVP SVLDHLAACV HQLQAMSLLD SSLVTQLDQC LDFEAGLQDL IHQLEHYGSV LESDPERLGQ LQERLAFLKR LERRFGLDLP QMLVRRDELR NHLAVGGAEA ALEKLKKEEE NARNCMDRAN QSLTVVREKT ARQLEQKLMT YLRPMGLENV RFKVQLNSAM PSENGADAVQ FLFSANPGQP LAPLAEVASG GEMSRFLLAL KTTLSAVDGR STLLFDEIDA GVSGRLSGEI ASLLKDLALH RQVFCVTHQP LVAAAADHHF RVSKLVEQGL TRSRVSQLRD TQSRMQELAD LAGGDLAEAR AYAASLLDHQ VA
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