Gene Hhal_2265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2265 
Symbol 
ID4709133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp2486063 
End bp2486590 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content69% 
IMG OID639856741 
ProductNusG antitermination factor 
Protein accessionYP_001003831 
Protein GI121999044 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR01955] transcriptional activator RfaH 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCGG AAGACTTCGA GGAGTTCGGG CGTTCCGACG CCTGGTATCT CGTCTATAGC 
AAGCCACGCC AGGAGGAGCG GGCGTGGTGG AATCTGGACC ACCAGGGGTT CCGCTGTTTC 
CTGCCTATGG CGCGGTTCCG GCGGCGGCGT CAGCGCCGCT ATCAGACGGT CATCGAGCCG 
ATGTTCCCGC GTTATCTGTT CATCCGCCTG GCCGCGGGGC TCGAGGACTG GAGCCCGATC 
CGCTCCACCA CCGGCGTCAG CGGGCTGGTG CGCTTCGGCA CCTGGCCGGC CCGCGTGCCG 
GACGGGCTGG TGGATACCAT CCGGGCGCGC ATCGAGGACG GTCACTGCGA CCTGGCCCCC 
GAACCGCTGC AGCCGGGCGA GCGGGTCCGC GTCCTCGATG GCCCGTTCCA GTCCTACGAG 
GGGATCTTCC GCGCCTCTCG CAGCGACGAG CGCGTCATGA TCCTGCTCGA CGTCGCCGGG 
CAGCACACCA CCCTGACCGT CTCGCAGCAC CAGATCGAGC GCGCCTGA
 
Protein sequence
MQAEDFEEFG RSDAWYLVYS KPRQEERAWW NLDHQGFRCF LPMARFRRRR QRRYQTVIEP 
MFPRYLFIRL AAGLEDWSPI RSTTGVSGLV RFGTWPARVP DGLVDTIRAR IEDGHCDLAP 
EPLQPGERVR VLDGPFQSYE GIFRASRSDE RVMILLDVAG QHTTLTVSQH QIERA