Gene Hhal_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1819 
Symbol 
ID4711042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1992514 
End bp1993698 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content70% 
IMG OID639856289 
Product4-coumarate--CoA ligase 
Protein accessionYP_001003385 
Protein GI121998598 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID[TIGR02372] 4-coumarate--CoA ligase, photoactive yellow protein activation family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0064272 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGGGC TGAATGCCGA TGAGGTGCTG CGCCTGCTGC GCAGCCTGAT TCCCGGCGAA 
CTGGCCGAGG GGCGCGGTCA CCGCAATGAC CCGCCCGAGG GAACGGACAT CTGCGCGGAC
ACCCGGCTGG ACCACACCCC CATCCGCGCC GATTCGCTGG ATCGGCTCCA TCTGGCCAGC
GCCCTGAATC GCCTCTTCTG CCTCCACGAG ACCGGGGTGG AGGACCGCCT CTTGACGGTG
CGCCGCATCG GCGATATCGC TGAACTGATC GCCGAGGGCA GCCAGCACAC CAGCGGCCTG
AGCTTCTCCA CCTCCGGCAG CACGGGCACC CCGCAATCCC ACCATCACAG CTGGTCGGCC
CTGACCCAGG AAGCCGAGGC CCTGGCCGCG GCCCTCGGCC ACCACCGACG CGTGATCGCC
TGGTTGCCGC TCCACCACCT GTATGGGTTC GTCTTCGGCG TCGCCCTACC CCGCACCCTG
GGCAGCACGG TGGTCGAGAG CCACGAGGCT CCCGCCGCCT TGTTCCGCAA CCCCGCACCC
GACGACCTCA TCGCCAGCGT CCCGGCGCGA TGGCGCTACC TACTCGACAG CGATCACCGC
TTCCCCGGCG GCACCGGCGT GAGTTCGACG GCCCCACTCG AGGCAGCCTG TCGGCACGGG
CTGCCGCGGG CCGGACTGGA CGCCCTGGTC GAGGTCTACG GCGCCACGGA GACCGGCGGG
ATCGGCTTGC GCTGGGCCCC CGCAGAGGAT TACCGACTCC TGCCCTACTG GCAGTGCAAC
GCCGACGGCA ACCTCCGGCG CGCACTGCCC GAAGGGTCGG CCGTGACCAT CACCCCGCTG
GATCGGCTCG AGTGGCTGGA CGAGCGGGTC TTCCGGCCCC GCGGGCGCAT CGATGACATC
ATCCAGATCG GCGGGGTCAA CGTCTCGCCG CAGCACGTGG CACGCCGCTT CGAGAGCCAC
GAGGCGGTTG CCGCCTGCGC GATACGCAGC CACGGAGAGG GCAGCCAGCG GCGGCTGAAG
GCCTTCATCG TCCCGGCTCA CCCCGAGACC GACCCCGAGG AGCTACGCCA GGCGCTGGAA
ACCTGGGCGT GGGAACACCT GCCGGCAGTG GAGCGGCCGA CCGACCTGCG CATCGGTCCC
GAGTTGCCGC GCAACGCCAT GGGCAAGCTG CAGGATTGGG ACTGA
 
Protein sequence
MQGLNADEVL RLLRSLIPGE LAEGRGHRND PPEGTDICAD TRLDHTPIRA DSLDRLHLAS 
ALNRLFCLHE TGVEDRLLTV RRIGDIAELI AEGSQHTSGL SFSTSGSTGT PQSHHHSWSA
LTQEAEALAA ALGHHRRVIA WLPLHHLYGF VFGVALPRTL GSTVVESHEA PAALFRNPAP
DDLIASVPAR WRYLLDSDHR FPGGTGVSST APLEAACRHG LPRAGLDALV EVYGATETGG
IGLRWAPAED YRLLPYWQCN ADGNLRRALP EGSAVTITPL DRLEWLDERV FRPRGRIDDI
IQIGGVNVSP QHVARRFESH EAVAACAIRS HGEGSQRRLK AFIVPAHPET DPEELRQALE
TWAWEHLPAV ERPTDLRIGP ELPRNAMGKL QDWD