| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1107 |
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| Symbol | |
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| ID | 4710053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1202590 |
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| End bp | 1204332 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639855579 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001002685 |
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| Protein GI | 121997898 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.185203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTATTG ATACCGGCGC CGCGAACCCG ACAGAAAACC CACCGGTGCG CGTGGTGCTC
TGCTGGCACA TGCACCAGCC GAGTTACCTC GACCCCGGCA CCGGCGACTA CCTGCTGCCG
TGGACCTACC TGCACGGCAT CAAGGACTAC GCCGACATGG CGGCCCACCT CGAGGCCAAC
CCAGCGGCCC GCGCCGTGGT CAATTTCTCG CCGGTACTCC TGGAGCAGCT GGAGGACTAC
AGCCGCCAGA TCGCCGGCTT CCTGGAGAGC GGCGAACGGC TGCGCGACCC CCTGCTGCGC
GCCCTGGCCA TGCCCACCCT GCCGGTCAAC AACCCGGAAC GCCGCCAGCT CGTGGAGCAG
TGTCAGCGCA TCAACCGCCA GCGGCTGGCG GACCCGTTCC CCGCCTTCCG ACACCTGCTC
GAGATCGCCG AGACGGTCAG CGCCCACCCG GCCAGCATGC GCTACCTCAG CGACGCCTTC
CTGGTCGACC TGATCACCTG GTACCACCTG GGCTGGATGG GCGAGACGGT GCGCCGCAGC
GAACCACGGG TCCAGCGGCT GATCGACAAG GGCGACGGCT TCACCCTCCA CGATCGGCGC
GAGCTGCTCG GTGTCATCGG CGAACTGCTC GCGGGACTGC CCCACCGCTA TCGGCACCTG
GCCGAGACCG GACGGGTGGA GCTGTCGATG ACACCCTACG CCCACCCGAT CCTGCCCCTA
CTCCAGGACC TGCAGTCCGC CCGCGAATCC TGGCCCGCGA GCCCGATGCC GGTGGTCGAT
CAATACCCCG GTGGCGAGGA ACGGGCGCGC TGGCACCTGG CGCGCGGCCT GGAGATCTTC
GAACACACCT TCGGCCACCG CCCGCACGGC TGCTGGCCGT CGGAGGGGGC CGTCAGCCAG
GCCACGCTCG CGCTGCTCCA ATCGTACGGT TTCCGCTGGA CGGCCAGTGG CGGTGCAGTG
CTCGACAACA GCCTGGGCGC AGAGGGCGGG GGGAACGGCC AGTGGCACCG CGCCTACACC
CTCGCCCCGC AGCACCCCGA AGCCGAGGGC CACGCGGCCA CACGCTGCTT CTTCCGCGAC
GACGGACTCT CCGATGCCAT CGGTTTCGAG TTCTCCGACT GGCACGGCGA CGACGCCGTG
GCCAACCTGG TCAGCCGCAT GGAGGCCATC GCCGCCGGCT GCGAGGCGCC GGAACAGACC
GTGATCTCGG TCATCATGGA CGGTGAGAAC GCCTGGGAGC ACTACCCGGC CAACGGCTTC
CATTTCCTGA ACGGGCTCTA CCAGCGCCTG GCCGAACACC CGGGGCTGAT CCTGACCACC
TTTGCCGAGG CCGCCGACGA GACCGAACCT CGCGATCTGC AGCGACTGGT GGCCGGCAGC
TGGGTCTACG GCACCCTATC CACCTGGATC GGCGAGGTGG ACAAGGACCG CGCCTGGGAG
CTCCTCGCCG AGGCCAAGCA GGCCTTCGAT CAGCGCGCCG GGGAACTCGA CGAGGCCACC
CGCATCCGGG CCGAGGCGCA GCTGGCCATC TGCGAGAGCT CCGATTGGTT CTGGTGGTTC
GGCGACTACA ACCCCGCCGA GGTGATCCGG GACTTCGACC ACCTCTACCG CGTCCAGCTC
GCCGCCCTCT ACCACACCCT GGGCCAGGAG CCGCCGGAGC ATCTCAGCCA CGCCTTCGCC
CGCCAGGGCC GCGGCCAGCC CGAGCGCGGC GGCGTCATGC GGCACGGACG CGCAGAGCCG
TGA
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| Protein sequence | MSIDTGAANP TENPPVRVVL CWHMHQPSYL DPGTGDYLLP WTYLHGIKDY ADMAAHLEAN
PAARAVVNFS PVLLEQLEDY SRQIAGFLES GERLRDPLLR ALAMPTLPVN NPERRQLVEQ
CQRINRQRLA DPFPAFRHLL EIAETVSAHP ASMRYLSDAF LVDLITWYHL GWMGETVRRS
EPRVQRLIDK GDGFTLHDRR ELLGVIGELL AGLPHRYRHL AETGRVELSM TPYAHPILPL
LQDLQSARES WPASPMPVVD QYPGGEERAR WHLARGLEIF EHTFGHRPHG CWPSEGAVSQ
ATLALLQSYG FRWTASGGAV LDNSLGAEGG GNGQWHRAYT LAPQHPEAEG HAATRCFFRD
DGLSDAIGFE FSDWHGDDAV ANLVSRMEAI AAGCEAPEQT VISVIMDGEN AWEHYPANGF
HFLNGLYQRL AEHPGLILTT FAEAADETEP RDLQRLVAGS WVYGTLSTWI GEVDKDRAWE
LLAEAKQAFD QRAGELDEAT RIRAEAQLAI CESSDWFWWF GDYNPAEVIR DFDHLYRVQL
AALYHTLGQE PPEHLSHAFA RQGRGQPERG GVMRHGRAEP
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