| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1061 |
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| Symbol | |
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| ID | 4709827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1149272 |
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| End bp | 1151347 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639855532 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001002639 |
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| Protein GI | 121997852 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGTTAT CGCTGGCCCT CGGTCCCACC GGTCCGGCGC TCGGCGCGGA GGCGGCGCTG
CCGCCGGTGG TCGCCACCGT GCCGCGGCTC GACGTGGACC CCGACGACTA CCCGGCGGCC
GTCTCCGTCG TCGGCCGCGA GGCCTACGCC AGCGGCCGGC GCCTCTCCCT GGATCAGGGC
CTCGATCGGG TCCCCGGCGT GCATACGCAG AACCGCTACA ACGCCGCCCA GGACCTGCGC
CTGTCGGTGC GCGGGTTCGG GGCCCGCTCA CCCTTTGGGG TGCGCGGCAT ACGGGCCTTG
GTCGACGACG TGCCGTACAC CGTGGCCGAC GGCCAGAGCC AGCTCGACGC CCTGGACCCG
GCCTTTGTGG AGCAGCTGGA GGTCATCCGC GGGCCGGCCT CCGCCCTCTA CGGCAACGCC
GCCGGCGGTG TCTTCCGCTT CACCACCCTG GAACCCCCGG AGAGCGGCGA GTTCCTCGGC
GGCGAGGTGC TCTTCGGCAG CCACGGCGAG CGGGCCCAGC GGGTCTGGGG CGGTCGTGCC
GAGGAGGCCT GGCGCACGGC GGTGACCGCC TCCAACCAGG AGATGGACGG CTACCGCGAC
CATTCGGGCG CGGCGCAGCG CCGACTGAAT ATCAAGCTCG ACCGCGATCT GGCCGGCGGC
GAGCGGCTGC GCTTTATCGC CAACCTCCTC GATGCGCCGG AGGCTCAAGA CCCCGGCGGG
CTGAGCCGCG AACAGGTGCG GGACGATCGT CGGCAAGCGA CGGACAACGC CGTGGACCGT
GACGCCGGCG AAGAGGTGGA GCAGCAGACC GGTGCCGTGA TCCTCACCGC CGAGCCGTCG
GCCACCGAGT TTTGGGAGGG GCGGGCCTTC CTGCAGCGCC GGGACTTCTA CCGGCGGAAC
CCGTTCCCGG GTGGTAATGG TGACCCAGGC GGCATTGTCA CCTTTGAGCG CTACTACGGC
GGCGTCGGCG GCCGTCACGT GCGGCGTACC GAGGCCGCCG GGCGCCCGGT GCAGGTGTCG
GTGGGCACGG ACGCCGAGTG GCAGTACGAC GACCGGCAAC GGTACGTGAA CAACAACGGT
CGTGAGGGTG AGCGGACCAA CGATCAGCGG GAGCGGGCCC AGGTGGTGGC CGGCTACCTG
CAGGCGGACT GGGAGGTGGC GCCGCGCTGG CGGCTGGTCG GTGGCGGGCG TCTGGACTGG
ACTCGGCTGA GCATCGATGA TCGCGAGGCG GGGTTGGATA CCGACAGTCA GACCTACACC
GAGCCCAGCT ACCTCGCCGG GGTGCGCTAC GCCGTGGCCG AGGACCACAG CCTCTACGCC
AAGGCCAGCT CCGCCTTCGA GACGCCGACG CTCTGGGAGC TGTGGGACCG GGACGCCGGG
GGCATCGACG ACACCATCGA GCCGCAGCAG GCGCGCTCCG TGGAGGTCGG CGTCAAGGGG
CGGGCCCTGG ATCGGCGGCT GCGCTACGAG CTGACCCTCT TCCAGGTGCG GACGGAGGAT
GAGCTGGTTC CGCAGGAGGA TGCAGACGGC CCGACCCGGT ATGCGAACGC CGGCGAGACT
CGCCGGCGTG GCGTGGAGTT GGGGGTGGAG GCCTTCCCCA CGGAGCGCCT GGAGGTGACG
GCCGCCCTGG CCTACGGGCA ATTTACCTTC CGGGATTTCG AGACGTCCGA GTTGGAGGGC
GTATCCGGCG CCGAGGACCC CGATCAGGTT CGTGGCAACC GCATCCCCGG TGTGCCGCGG
GCCCACGGCT ACCTGGAGAC GGCCTGGCAG GCCCCCAGCG GCTGGCGCTG GGCCGCCGAT
GTGCGCGCCA GCGAGGGCAT CTGGGCCGAC GACCGCAACA CCCAGCGCAG CTCCGGCTAT
ACGGAGGTCG GCCTCCACGC CAGCCGGACC TTCGTCACCG ACGCCTACGA GGCCGAGCCC
TTCTTCGGGG TGAACAACCT CTTCGACGCC ACCTACGACG CCAACGTGCG CATCAACGCG
GCCAACGAAT CGGATAACAG TCTGGAAGAC GGTGGCTACT TCGAGCCGGC CCCGGAGCGG
ACCATCTACG CCGGTATCCG CTTCGCGACC TACTGA
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| Protein sequence | MGLSLALGPT GPALGAEAAL PPVVATVPRL DVDPDDYPAA VSVVGREAYA SGRRLSLDQG
LDRVPGVHTQ NRYNAAQDLR LSVRGFGARS PFGVRGIRAL VDDVPYTVAD GQSQLDALDP
AFVEQLEVIR GPASALYGNA AGGVFRFTTL EPPESGEFLG GEVLFGSHGE RAQRVWGGRA
EEAWRTAVTA SNQEMDGYRD HSGAAQRRLN IKLDRDLAGG ERLRFIANLL DAPEAQDPGG
LSREQVRDDR RQATDNAVDR DAGEEVEQQT GAVILTAEPS ATEFWEGRAF LQRRDFYRRN
PFPGGNGDPG GIVTFERYYG GVGGRHVRRT EAAGRPVQVS VGTDAEWQYD DRQRYVNNNG
REGERTNDQR ERAQVVAGYL QADWEVAPRW RLVGGGRLDW TRLSIDDREA GLDTDSQTYT
EPSYLAGVRY AVAEDHSLYA KASSAFETPT LWELWDRDAG GIDDTIEPQQ ARSVEVGVKG
RALDRRLRYE LTLFQVRTED ELVPQEDADG PTRYANAGET RRRGVELGVE AFPTERLEVT
AALAYGQFTF RDFETSELEG VSGAEDPDQV RGNRIPGVPR AHGYLETAWQ APSGWRWAAD
VRASEGIWAD DRNTQRSSGY TEVGLHASRT FVTDAYEAEP FFGVNNLFDA TYDANVRINA
ANESDNSLED GGYFEPAPER TIYAGIRFAT Y
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