| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1296 |
|---|
| Symbol | |
|---|
| ID | 4682100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | - |
|---|
| Start bp | 1214515 |
|---|
| End bp | 1215483 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 639854023 |
|---|
| Product | ribosomal large subunit pseudouridine synthase A |
|---|
| Protein accession | YP_001000956 |
|---|
| Protein GI | 121612140 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACTT TTTTAGTAGA TGAAAATTCA AGGCTTGATG TATTTTTGGC TAAAAAATTA
AACCAAAGTC GCAATCAAGT TGCTTTACTT ATAGAAAAAG ATTGTGTACA GGTTAATGAT
AAAATTCAAG ATAAAAATTC ATTTAAGCTT AAAAATGGTG ATATTATTTC TATTGCAAGT
TTAAAGCTTT GCAATGAGAT AAAACCTCAG TTTGAAGTGG ATTTTGATAT TGATGTGTTA
TACGAAGATG AAGACTTGCT TGTTTTAAAT AAACCTTCAA ATTTAGTCGT TCATGGAGCA
AGTAGCGTTA AAAATGCCAC TTTGGTGGAT TGGTTAATAG AAAAAAAATA TACTTTATCA
AATTTAGGAG GAGAGATAAG AGCTGGTCTT GTCCATAGAT TAGATAAAGA TACAAGCGGA
GCTATACTGA TAGCGAAAAA TAATTTCACC CATCAAAAAT TAAGCGAACA GCTTGCAGAT
AAAAGCATGG GAAGAATTTA CCTTGCGTTA ATTGATTTGC CACTAAAAGA AGATAAAATT
ATAGTAGAAA AATTTTTAAT GCGTTCGCCT TCTAATGCTA TTAAAAAAAT AGCCATAGAT
AAGGAAAATA AATTCAGTAA AAACGCAAAA TCAGCTTTTA TAAATATAGT AAAAACTGAA
AATTTAACTT TGATGGCTGC TAAGCTTTTT ACAGGAAGAA CTCATCAAAT TAGAGCGCAT
TTGGCTAGTT TAAATCGCCA TATTTTAGGT GATAGTTTGT ATGGTTATAA GGGTAAGTAT
GATTGTAGGA TAATGTTGCA TGCTTATTTT TTGTATTTTA TCCATCCAAA AACCAAAGAG
CAAATTTTTG TTAAAGCACC TTTGATGGAA GATTTTAAAA ATATTATGTT TAAACAAATT
AATTTAGGAG AGAATGATGA AAAGATTTCG CTTGGGTTTT TACTTGAGTT TTTTAACTCT
TTTGCTTAG
|
|---|
| Protein sequence | MQTFLVDENS RLDVFLAKKL NQSRNQVALL IEKDCVQVND KIQDKNSFKL KNGDIISIAS
LKLCNEIKPQ FEVDFDIDVL YEDEDLLVLN KPSNLVVHGA SSVKNATLVD WLIEKKYTLS
NLGGEIRAGL VHRLDKDTSG AILIAKNNFT HQKLSEQLAD KSMGRIYLAL IDLPLKEDKI
IVEKFLMRSP SNAIKKIAID KENKFSKNAK SAFINIVKTE NLTLMAAKLF TGRTHQIRAH
LASLNRHILG DSLYGYKGKY DCRIMLHAYF LYFIHPKTKE QIFVKAPLME DFKNIMFKQI
NLGENDEKIS LGFLLEFFNS FA
|
|---|
| |