Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_1226 |
Symbol | glcD |
ID | 4683231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 1143294 |
End bp | 1144676 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639853953 |
Product | glycolate oxidase, subunit GlcD |
Protein accession | YP_001000887 |
Protein GI | 121612904 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0612986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG AATTTGAACA ATATTTTAAA CGATTTTTAG GAGAAGAAAA CGCTTATTTT GATGAAATTC ACAAAAGAGC TTATAGTTAC GATGCGACAA AAAAACATTA TTTACCCGAT GGGGTTCTTT TTCCAAGAAA TGAAGAAGAT ATTGCTCAAA TTTTAAAATT TTGCAATGAA AATAATATCA TAGTCATACC TCGAGGCTCA GGATCTGGTT TTACAGGAGG AGCTTTAGCT GTTAATGGCG GGGTGGTGCT TGCTTTTGAA AAGCATATGA ATAAAATTTT AGAAATTGAT CTTGAAAATT TAGTGGCTGT TGTGCAACCT GGGGTTATTA ATATACATTT ACAAAAAGAA GTGGCTAAAT ATGGACTTTT TTACCCACCT GACCCTGCTA GCATGGAGTA TTCAAGCTTA GGGGGTAATG TAAGCGAAAA TGCTGGGGGA ATGAGAGCTG CAAAATATGG CATTACAAAA GATTATGTGA TGGCTTTAAG GGCTGTTTTG CCTAGCGGAG AAATCATTCG TGCAGGGAAA CGCACTATTA AAGATGTAGC AGGTTATAAT TTGGCAGGAA TTTTAATCGC TAGTGAAGGT TCTTTGGCAG TTTTAAGTGA GCTTACTTTA AAATTAATAC CTTTGCCTAA ATTTAAAAAA ACTGCTTTTG CTATTTTTCC AAGTGTAAAA AGTGCTATGA ATGCGGTTTA CAAAAGTCTT GCTAGCGGTG TAAGTCCTGT ATCTATGGAA TTTTTAGACA ATCTTAGCAT TAGAGCGGTT GAGAGCAAAT TTAATAAAGG TTTGCCTATA GAAGCTGGAG CTATTTTGAT TGCTGATGTG GATGGTAATG TTAAAGAGGC TATTGATGAG GATTTAAGAA ATTTAGAATA TTATTTTTTA GAAGCTGGCG CTAGCGAATT TAAAATAGCA AAAGATGAAC AAGAAACCGC AGATATTTGG TTTGCTAGAA GAAATTGTTC TCAAAGCATT GCCATGTATG GAACTTTAAA ACTTAATGAA GATATTACAG TTCCGCGTTC TAAACTACCT ACTTTGCTTG AAGGTATAGA TGAGATTTCT AAAAAATATG GTTTTAAAAT TCCTTGTTTT GGACATACAG GGGATGGAAA TGTGCATACT AATGTTATGG TTCCTGATAA AAATGATAAA GAGCAGGTGA AAAAAGGCTA TGAAGCTGTG GAAGAGATTT TTAAATTAAC AGTGAAACTT GGAGGAACTT TAAGCGGAGA GCATGGTATC GGACTCTCTA AGGCACCTTT TATGAATTTA GCTTTTTCTG AAGCCGAAAT GAATTTAATG AGAAATATTA AAAAAGCTTT TGATCCAAAT AATATACTAA ATCCTTTTAA AATGGGACTT TAG
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Protein sequence | MKKEFEQYFK RFLGEENAYF DEIHKRAYSY DATKKHYLPD GVLFPRNEED IAQILKFCNE NNIIVIPRGS GSGFTGGALA VNGGVVLAFE KHMNKILEID LENLVAVVQP GVINIHLQKE VAKYGLFYPP DPASMEYSSL GGNVSENAGG MRAAKYGITK DYVMALRAVL PSGEIIRAGK RTIKDVAGYN LAGILIASEG SLAVLSELTL KLIPLPKFKK TAFAIFPSVK SAMNAVYKSL ASGVSPVSME FLDNLSIRAV ESKFNKGLPI EAGAILIADV DGNVKEAIDE DLRNLEYYFL EAGASEFKIA KDEQETADIW FARRNCSQSI AMYGTLKLNE DITVPRSKLP TLLEGIDEIS KKYGFKIPCF GHTGDGNVHT NVMVPDKNDK EQVKKGYEAV EEIFKLTVKL GGTLSGEHGI GLSKAPFMNL AFSEAEMNLM RNIKKAFDPN NILNPFKMGL
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