Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4486 |
Symbol | |
ID | 4692897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4963086 |
End bp | 4965230 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639852233 |
Product | helicase c2 |
Protein accession | YP_999205 |
Protein GI | 121611398 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.24845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGCCG GGGTTTTTGC CCCGGGCGGC GTGCTGGCGC AGGCCGATGC GCATTTTCAA CCGCGACCGG GGCAGACCCG GATGGCCATG GCCGTGGCGC GGACCATGGC CGCCGGCGGC CGCCTGGTGG TGGAGGCGGG CACCGGGGTG GGCAAGACCT TTTCCTATCT GGTTCCGGCG CTGCTCAGTG GCGAGCGGGT TTTGCTGTCC ACGGCCACCA AGGTGTTGCA AGACCAGTTG TTCGCGCGCG ACCTGCCCGG CCTGGCGCGG ACGCTGGGCC TGCCCGTGCG CATGGCTTTG CTCAAGGGCC GCGCCAGCTA TCTGTGCCTG CACCGCATGG AACTGGCGCG CCAGGATGCC TTGGCCCAAG AGCCTGGCGT GGCGCGCGCG CTGGCCAGCG TGCAGGACTG GTCGCGCCAC ACGCTGGCGG GGGATTTGGC GGAACTGACG GGGCTGGACG AGCGCTCGCC GGTGCTGCCC CTGGTCACAT CGACCCGCGA GAATTGCCTG GGCACGCCCT GCCCGCGGTT TCGTGATTGC CATGTGCACC GGGCGCGGCG CGAGGCGCTG GCCGCCGACA TGGTGGTCAT CAACCACCAT CTTTTCTTTG CCGATGGGGC GCTGCGCGAG TCGGGTCTGG CGCAACTGCT GCCCACGGTG CGCGTGGTGG TGTTCGATGA GGCGCACCAG ATCAACGAGA CCGGGGTGCA ATTCCTGGGC GCGCAACTGT CTACCGGCCA ACTGCTGGAC TTCGGCCGGG ATCTGCTGGT GGCCGGCCTG CGGCATGCCC GTGGCCTGGC GGACTGGAGC GGGCTGGCCG CCGGGCTGGA ACTGGCCGCG CGCGATCTGC GCCTGGTGGC CGCAGCGCTG CCGGCCGGGA CCCGGCTGCA TTGGGGGCAC GAATCGCCGC AAGGCGTTTC GTCGGCACCG CAAGGGCAAG GCGTTTCGGA TCGAGAATGG GCGCCACGGG GCGCTCCCGA CCCGGAGCCG GCACCGCAAG GCGTTCCAGC CCAGGCGTGG CAGAGCGCGC TGCAGCGCGT TGCATCGGCG GGCGCGCAGG CCTGCTCGGC GCTGGCGCCG GTCAGCGAGA TGGCGCCGGA CCTGCTGCGC CTGCACCAGC GGGGCTGCGA GTTGCTCGAT GCCCTGGCCC GGTTCTGCGG CCCGGCGCAT CCCGACGCGG TGCGCTGGGT GGAGGTGGCT GCGCAACTGC GTCTGATCGA GTCGCCGCTG GACATTGCCC AGGTCATGCG CGAGCGTCTG CTGGCGCCGC CGGCGGGAGG CGATAGCCCG GAGAAACCCG CCGCAGGCCC GGGCAGGGCC TGGATTTTCA CCTCGGCGAC CTTGGGCGAG GACGAGCAAC TGAGCTGGTT CACGCAGCGG GCGGGGCTGC AGGATGCGGA AATTTTGCGC GTCGCCAGCC CGTTCGACTA CGCCGCGCAG GCCGCCTGGT ACGTGCCGCG CCATTTGCCC GCGCCGGCGA GTCCGGCGCA CAGCCCGGCG CTGGCGCTAT GGGTGGGCAA GGCCGCAGAG CAGTTGGGCG GGCGCACGCT GGTGCTGACC ACCACGCTCA AGGCCCTGCG GGCCATTGGC GCGGCGCTCC AGCAGCAGTT CGCCGCCGCC CCGGGCGCGC GGCTGCAGGT GCTGGTGCAG GGCCAGTGGC CCCAGCGGCG GCTGATGGAG CGCTTTCGCG CAGGCGCAGA CAATGGCCAG CCGGGCTGCA TCCTGGTCGC ATCGGCCACG TTCCGCGAGG GTTTCGACGT GCCCGGGGAG GCTTTGCAAC TGGTGGTCAT CGACAAACTG CCGTTTCCGC CGCCGGGCGA TCCATTGGTT CAGGCGCGCA TGCGGCGCAT CGACCAGGCC GGGGGCCGGT CGTTCAAGGA CTATGCGCTG CCTGAGGCCG CCGTGGCGCT CAAGCAGGGC GCCGGGCGCC TGATCCGGCG TGAATCGGAC CGCGGCATCC TGGTGCTCGG CGACACCCGG CTGCTCACCA TGGGCTATGG CAAACGCCTG CTGGCCGCCT TGCCGCCCAT GCGGAAACTG GCATCGGAGG ACGAATTCGA GGCCGCCTTG CTGGCCCTTG CCCGTGGTGC TGCCTGCGCC GCCGGCGCTA CCAGATCTTC CACCACGGCT CCTGCCGGCG CTTGA
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Protein sequence | MVAGVFAPGG VLAQADAHFQ PRPGQTRMAM AVARTMAAGG RLVVEAGTGV GKTFSYLVPA LLSGERVLLS TATKVLQDQL FARDLPGLAR TLGLPVRMAL LKGRASYLCL HRMELARQDA LAQEPGVARA LASVQDWSRH TLAGDLAELT GLDERSPVLP LVTSTRENCL GTPCPRFRDC HVHRARREAL AADMVVINHH LFFADGALRE SGLAQLLPTV RVVVFDEAHQ INETGVQFLG AQLSTGQLLD FGRDLLVAGL RHARGLADWS GLAAGLELAA RDLRLVAAAL PAGTRLHWGH ESPQGVSSAP QGQGVSDREW APRGAPDPEP APQGVPAQAW QSALQRVASA GAQACSALAP VSEMAPDLLR LHQRGCELLD ALARFCGPAH PDAVRWVEVA AQLRLIESPL DIAQVMRERL LAPPAGGDSP EKPAAGPGRA WIFTSATLGE DEQLSWFTQR AGLQDAEILR VASPFDYAAQ AAWYVPRHLP APASPAHSPA LALWVGKAAE QLGGRTLVLT TTLKALRAIG AALQQQFAAA PGARLQVLVQ GQWPQRRLME RFRAGADNGQ PGCILVASAT FREGFDVPGE ALQLVVIDKL PFPPPGDPLV QARMRRIDQA GGRSFKDYAL PEAAVALKQG AGRLIRRESD RGILVLGDTR LLTMGYGKRL LAALPPMRKL ASEDEFEAAL LALARGAACA AGATRSSTTA PAGA
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