| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1279 |
|---|
| Symbol | |
|---|
| ID | 4695319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1414412 |
|---|
| End bp | 1415893 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639849051 |
|---|
| Product | major facilitator superfamily transporter |
|---|
| Protein accession | YP_996065 |
|---|
| Protein GI | 121608258 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CCCGGCCGCC CGAAGGCGCT CATACCGTAG CCGAAGGCGA AGGTACTCCA
GTGAGCCAGT TGCTGCCGCG GCCGGTTGCC ATCACCGTCT TTTTGGCCCT GGCTTTCGCG
TATTTCCTGT CGGCTTTGGT GCGGGCTGTC ACCGCCACGC TGGCGCCGAC ATTGGCGCCG
GAGTTTGCGT TGCAGGCGCG CGATCTGGGT CTGCTGGCCG GGGGTTACTT TCTGGGCTTT
GCCGCCATGC AGTTGCCATT GGGCCGCTGG CTGGACCGCC ATGGTCCGCG CAAGGTATTG
CTGGGTTTTC TGGGCTTGGC CGTGCTGGGC TGCCTGGTGT TCGCGGCGGC CACCGGCTTT
TCGGGTCTGC TGGCCGGGCG CGTGTTGTGT GGCGCAGGCG TCAGCGCCTG CCTGATGGCG
CCGCTCACGG GCTATCGCCG CTGGTTCGCG CCCCAGGCGC AGATGAGTGC CAATTCCTGG
ATGCTGATGA TGGGCTCGCT GGGCATGGTG GCCTCGACGC TGCCGGTGCA ATGGGCCTTG
CCGCTGTGGG GCTGGCGGCC CTTGTTCTGG GCCTTGGCGG CCCTGATCGC GCTGGCCATG
GTGGTGATTG CGCTGCGGGT GCCGGGCTGG GCCAGTGGCA CCGACGGCGC AGGTCGCGCA
GGTGGCACCG ATGACACAGG CGGCGCTGCG GCCTCGGGTT ACGCCCTGGT GTGGCGCCAC
CCGTACTTTC AGCGCCTGGC ACCGCTGGGC TTTTTCTGTT ACGGCGGCAT GATGGCCATG
CAGACACTGT GGGCCGGGCC CTGGATGCAG CGCGTGGCGG GCTATACGCC GCTGGAGTCT
GCGGCCGGCC TGTTCGGCAT CAATGTCGCC ATGCTCGGCG TGTTCTGGAC CTGGGGCATG
GTCAACCCCT GGCTGCTGCG CAAGGGCTGG GGGGCCGATC GGCTGCTGGC CCTGGGGCTG
CCGTTGAGCC TGGCAGTGCT GCTGGGCATC ATCATCGCCG GACCCCGGGC CGGGGGTGGC
GCCTGGGCGC TGTATTGCGT GTCGTGCACC TGCGTGGCGC TATCGCAGCC GGCACTGGCG
CTGGCGTTCC CGCAGGCGCT GGCCGGACGC GCGCTATCGG CCTTCAACCT GGTCATTTTT
GCCGGCGTGT TCACGGTGCA ATGGGGCATC GGCCTGGCGG TGGATGCGTT TGTTGCCGTG
GGGGCCACAG ATTTCGCCGC CGGGCCGCCC CAAGGCGAAA TGCGACCCCC TCGGGGGGCA
GGGAGCGAAG CGACCGTGGG GGCCACAGGT TTCGCCGCCG GGCCGCCCCA AGGCGAAATA
CGACCCCCTC GGGGGGCAGG GAGCGAAGCG ACCGTGGGGG CCAACACCAC GGCGGCTTTT
CAGGCGGCGA TGGCACTGTA CTTGGCGTGC AACGCGGCGG CCTACGCCTG GTTTCTGTTT
CGGGGCCAGC GCCATAATGC GCGGCAAACC CCCGTCCCAT GA
|
|---|
| Protein sequence | MSAARPPEGA HTVAEGEGTP VSQLLPRPVA ITVFLALAFA YFLSALVRAV TATLAPTLAP
EFALQARDLG LLAGGYFLGF AAMQLPLGRW LDRHGPRKVL LGFLGLAVLG CLVFAAATGF
SGLLAGRVLC GAGVSACLMA PLTGYRRWFA PQAQMSANSW MLMMGSLGMV ASTLPVQWAL
PLWGWRPLFW ALAALIALAM VVIALRVPGW ASGTDGAGRA GGTDDTGGAA ASGYALVWRH
PYFQRLAPLG FFCYGGMMAM QTLWAGPWMQ RVAGYTPLES AAGLFGINVA MLGVFWTWGM
VNPWLLRKGW GADRLLALGL PLSLAVLLGI IIAGPRAGGG AWALYCVSCT CVALSQPALA
LAFPQALAGR ALSAFNLVIF AGVFTVQWGI GLAVDAFVAV GATDFAAGPP QGEMRPPRGA
GSEATVGATG FAAGPPQGEI RPPRGAGSEA TVGANTTAAF QAAMALYLAC NAAAYAWFLF
RGQRHNARQT PVP
|
|---|
| |