Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0072 |
Symbol | |
ID | 4693298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 88183 |
End bp | 89091 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639847858 |
Product | HflC protein |
Protein accession | YP_994883 |
Protein GI | 121607076 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.055112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCGAG TCGGACTTAT TGCCTCCACC GTCCTGGTGG CATTGGCGCT GATGAACTCC ATGCTTTTCG TCGTCGATCA GCGCCAGTTT GGCGTTCTTT ATGCGCTGGG ACAGATCAAG GACGTGATTA CCGAGCCGGG CCTGAACTTC AAGCTGCCGC CGCCTTTCCA GAACGTGACC TACATCGACA AACGCCTGCT GACCTTGGAC AGCACGGACA CCGAGCCGAT GCTGACCGCT GAAAAGCAGC GGGTCGTGAT CGACTGGTAT GTGCGCTGGC GCATCTCTGA ACCGACGGCA TATATCCGCA ACGTGGGCCA GGATGAAAGC GCCGGCGCGA TGCAGCTCAA CCGCGTGGTG CGCAATGCCT TCCAGGAGGA GATCAACAAG CGCACGGTCA AAGAGTTGCT TTCGCTCAAG CGCGAGGCAT TGATGGCCGA TGTGAAGCGC GAAGTGCTCG AAGCCGTCCG CGGCGTCAAA CCCTGGGGCG TGGACGTGGT TGACGTGCGC ATCACCCGCG TCGACTACGT GGAGGCCATT ACCGAATCCG TGTACCGCCG CATGGAGGCC GAACGCAAGC GGGTGGCCAA CGAACTACGC TCCACCGGGG CTGCCGAGGG CGAAAAAATC CGGGCCGACG CCGACCGTCA GCGCGAAATC ACGATCGCCA ACGCCTACCG CGACGCACAA AAGAGCAAGG GCGAGGGCGA CGCGCAAGCG GCCCGCATCT ACGCCGAAGC CTTCGGCCGC GACCCGCAGT TCGCCCAGTT CTATCGCAGC CTGGAAGCCT ACAAGGCGAG CTTCAATAAA AAAAGCGATG TGCTGGTGGT CGACCCTTCG TCGTCAGATT TCTTCAAAGC CTTCCAGGGC CATGCGCCAG CGGCTGCCCA GCCGGGTGCG CGCAAGTAA
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Protein sequence | MNRVGLIAST VLVALALMNS MLFVVDQRQF GVLYALGQIK DVITEPGLNF KLPPPFQNVT YIDKRLLTLD STDTEPMLTA EKQRVVIDWY VRWRISEPTA YIRNVGQDES AGAMQLNRVV RNAFQEEINK RTVKELLSLK REALMADVKR EVLEAVRGVK PWGVDVVDVR ITRVDYVEAI TESVYRRMEA ERKRVANELR STGAAEGEKI RADADRQREI TIANAYRDAQ KSKGEGDAQA ARIYAEAFGR DPQFAQFYRS LEAYKASFNK KSDVLVVDPS SSDFFKAFQG HAPAAAQPGA RK
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