Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0039 |
Symbol | xerD |
ID | 4684112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | + |
Start bp | 44758 |
End bp | 45696 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639841239 |
Product | tyrosine recombinase XerD |
Protein accession | YP_988378 |
Protein GI | 121601884 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 71 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA ATGTTATAAT AGATCGTTTT CTTGAAATGA TGAGTGCTGA GCGGGGAGCT TCTGCTCATA CACTGGCTGC GTATCAGCAT GATTTACAAT GGGCACAAGA CAAATTGTCT TCGTGTTCTG TTTCACTTTT TTCAGCACGA AAAGAAGATT TGATTAGTCT CTTGTCGCTG ATGCATAAAG CTGGTTTTGC AGCAACTTCG CAGGCACGTC GTTTGTCAAC ATTGCGTCAA TTTTATCAAT TTCTTTATGC TGAAAAATTG CGAGAAGATG ATCCTTCCGG TGATATTGAC GCACCGCGTC AAGGGCACCC TTTGCCAAAG ATTATGAGTG AGGATGTGGT TACAAAATTA CTTGATTTTG CGCAATTAGA AACAAATCAA GCAGAGTATG GGTCTAAGAA TTATTTTCGT GCGTTGCGTC TTCAGGTCCT GATTGAAATG CTTTATGCTA CGGGATTACG CATTAGTGAA TTGGTGAGTC TTCCGGTTCA AACGGTGCGG GGGAAGGAGC AATATATTTT AGTGCGCGGC AAGGGTGGAA AAGAGCGCAT GGTTCTTTTA TCTGCGAAAG CACGCCAGGT TCTTTCTGAG TGGTTAGTTT TGCGGGATCA AGGAAAAGAT GCTACAAGCC CTTATCTTTT TCCTGCACAT TCATCGACAG GGTACATTGC TCGCCAATTT ATTGCACGGG GATTAAAAGA TCTTGCGAAA AGAGCAGGAA TAAGAGGCGA TTGTTTCTCT CCTCATGTTT TGCGTCACGC TTTTGCTAGC CATCTTTTGC AAAATGGTGC TGATTTGCGT GCAGTTCAGC ATTTATTAGG TCATTGTGAT ATTTCGACCA CGCAAATTTA TACACATGTG CTAGAAACAG GTCTTTATCA TTTGGTTAAT GAACATCATC CCCTTGCCGA CCAGGATAAG GCCAAGTAA
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Protein sequence | MKNNVIIDRF LEMMSAERGA SAHTLAAYQH DLQWAQDKLS SCSVSLFSAR KEDLISLLSL MHKAGFAATS QARRLSTLRQ FYQFLYAEKL REDDPSGDID APRQGHPLPK IMSEDVVTKL LDFAQLETNQ AEYGSKNYFR ALRLQVLIEM LYATGLRISE LVSLPVQTVR GKEQYILVRG KGGKERMVLL SAKARQVLSE WLVLRDQGKD ATSPYLFPAH SSTGYIARQF IARGLKDLAK RAGIRGDCFS PHVLRHAFAS HLLQNGADLR AVQHLLGHCD ISTTQIYTHV LETGLYHLVN EHHPLADQDK AK
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