| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0113 |
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| Symbol | |
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| ID | 4671270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 125743 |
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| End bp | 126966 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639837245 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_984444 |
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| Protein GI | 121592548 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.378923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTCT CCCGTACACA ACCGCTGTGG GTCATGCTGC TCACGCTGCT GTCGGGCTTT
GCGCTGAGCC AGGCTTACCG CACCACCACC GCCATCGTGG CCCAGGGCCT GCAGGCAGAT
TTCGGCCTGC AGGCTTCCTC GTTGGGGGCG TTTGCCGGAC TGTTTGGTTT GTCGTTCGGC
ATTGCGCAAC TGCTGATGGG CATCGCACTG GACCGCTACG GCCTGCGCCG CACGGTGCTG
GTGGCTGCGC CCCTGGGCAT CGCTGGCGCG GCCCTGTCTG CGCTGGCGCC CAGCTATGGC
TGGCTGATGG TCGGTCAGGT GCTGATCGGG GTGGGCTATT CACCCGCCTT CGTGGCCTGC
ACGCTGTTCA TTGCGCGCTA TTTCGCGGCC GACCGGTTTG CCTTTTTCTC GGGCCTGAGC
ATGGGCCTGG GCGGGCTGGG GTTGCTGTTC ACCGGCACAC CGCTGGCCTG GGTGGTGCAG
CACTGGGGCT GGCGTGCCGG CTTTGGCCTG CTGGCAGGCC TGAGCCTGCT GTCGTGGCTG
TTGATTTATG CGCTGGTGCA TGAACCGGCA CGTGCCGATA CCGCACACCG TCCAGCCAGC
AGCTGGGGGG AGGCGCTGAC GGGCATGGGA CGGCTCTTTA CCGTGCCACA CACCTGGGGC
ATCGTGATCC TCGGCATGTC GTGCTATGCG GCCTTTTTGT CGCTGCGCGG CCTGTGGCTG
GGGCCTCTGC TGATCGACCG CTACGGTTTT TCGCTGGTGG ACAGTGGCAA CGTGGCGCTG
GTGTTGTCGC TGATTGCGCT GTTCACCCCC GCCGCTTTCG GCCGCATGGA CCCGGGCCCC
GCCCGGCGCC GCACCTGGGT GGGCCGCGCT TCGCTGTCGA TGGCCGGCCT GTTCGCCATC
ATGGCCTGGG TCAACAACGC CCACGCCATG GTGGCGCTGA TGATCGCGAT GGGACTGCTG
TCAGGCTACA GCATCTTGCA ATATGCCGAC GTGCGCTCGT CCTACCCCAA CGAACAGACG
GGACGCGCCC TGTCTCTCTA CACCATGGCC ATGTTTCTGG GGGTGGCGCT GATGCAATCG
CTGACCGGCG CCGTGGCCGC CTGGGCCACC AGCGCCGGGC TGGAGCCCTA CCGCGCGGTG
TTGCTGTGCA TCGCCGCCTG GCTGGCGCTG GCTTCGCTGG CCTTCAGGCT GCTGCCAGCG
TCCGCGCTGC TCCAGCAACG GTAA
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| Protein sequence | MRLSRTQPLW VMLLTLLSGF ALSQAYRTTT AIVAQGLQAD FGLQASSLGA FAGLFGLSFG
IAQLLMGIAL DRYGLRRTVL VAAPLGIAGA ALSALAPSYG WLMVGQVLIG VGYSPAFVAC
TLFIARYFAA DRFAFFSGLS MGLGGLGLLF TGTPLAWVVQ HWGWRAGFGL LAGLSLLSWL
LIYALVHEPA RADTAHRPAS SWGEALTGMG RLFTVPHTWG IVILGMSCYA AFLSLRGLWL
GPLLIDRYGF SLVDSGNVAL VLSLIALFTP AAFGRMDPGP ARRRTWVGRA SLSMAGLFAI
MAWVNNAHAM VALMIAMGLL SGYSILQYAD VRSSYPNEQT GRALSLYTMA MFLGVALMQS
LTGAVAAWAT SAGLEPYRAV LLCIAAWLAL ASLAFRLLPA SALLQQR
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