Gene Pnap_3977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3977 
Symbol 
ID4687376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4244727 
End bp4245302 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content58% 
IMG OID639836994 
Producthypothetical protein 
Protein accessionYP_984193 
Protein GI121606864 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.278449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGGCT CATCGCGCTT TACCGCCATT CTGGATGCCA ATGTCCTGTA TCCCCAATTG 
CTCCGCGACA CCTTGCTGAG CCTGGCTGTT GCACGCCTTT ACCACGCACG GTGGAGCGCC
ACGATTCACG ATGAATGGAC GCGCAACCTG GCAAAAGACA GGCCGGAACT GGCGGCAAGG
CTACCAGCGG TGGTCGAGCG GATGAACGCC AGCGTGCCCG ACTGCCTGGT GACGAATTAC
GAAAAGCTGG CCAACAGCAT CGAGTTACCC GACCCTGACG ACCGGCATGT GCTGGCCGCC
GCCATTGTTG GCCATGCGGA CGCCATCGTC ACCTTCAACA CCAAAGACTT TCCCCAAGCC
GTACTGCAGC CTTACGGCAT TGAAGTGCAA CACCCCGACG AGTTTGTGAT GAACCAGTTG
CAGCTGCAGA AAATACCTGC GCTGAGCGCC ATCAAGAAAA TGCGCGCCCG CTGGACGAAT
CCTGAACGGC CAGCCGAGGA GTTAATTGCC GCTTTCGAGA AACGCGGCTT GCCTCTGACG
GCTGATCTGT TGCGTGAGGC GGTGGATTTG ATTTAA
 
Protein sequence
MAGSSRFTAI LDANVLYPQL LRDTLLSLAV ARLYHARWSA TIHDEWTRNL AKDRPELAAR 
LPAVVERMNA SVPDCLVTNY EKLANSIELP DPDDRHVLAA AIVGHADAIV TFNTKDFPQA
VLQPYGIEVQ HPDEFVMNQL QLQKIPALSA IKKMRARWTN PERPAEELIA AFEKRGLPLT
ADLLREAVDL I