Gene Pnap_3928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3928 
Symbol 
ID4689177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4192453 
End bp4193028 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content50% 
IMG OID639836946 
Productresolvase domain-containing protein 
Protein accessionYP_984145 
Protein GI121606816 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.272515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000753359 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGGTC AAAATGTTGG ATACGTTCGT GTTTCGACCA TCATCCAAAA TACCGCCCGA 
CAACTGGATG GTGTTTCCCT TCATAAAATT TTCGAAGACA AAGCATCCGG GAAAAATGTT
GACCGACCAC AATTGACAGC ATGCCTTGCC CATCTGCGCG AAGGTGACAC GCTTCACGTT
CACTCAATGG ACCGCCTCTG TCGCAATCTT GATGACCTTC GCCGCATTGT CAAAGACCTG
ACCAGCCGTG GAGTCTTGGT CAGATTTCAC AAAGAAGGTC TTTCATTCAC GGGTGAAGAT
TCGCCCATGT CAAATCTGCT GTTGTCGATG CTGGGTGCCG TTGCCGAATT CGAACGGTCC
ATCATCCTTG AACGTCAGCG TGAGGGCATC CAAATTGCAA AGGTCGAGGG TAAGTACAAA
GGTCGAAAAG CTTCGCTGAC CAAAGAGCGG GTTCTTGAAC TTCAGCGTCG TGCTGGTGCT
GGAGAGAAAA AGACTGTCCT TGCTCGGGAG TTCGGAGTCA GCCGGGAAAC CGTGTACACG
TATCTAAATA CTGAGAAATC AGCCAGTGTC GGGTAA
 
Protein sequence
MTGQNVGYVR VSTIIQNTAR QLDGVSLHKI FEDKASGKNV DRPQLTACLA HLREGDTLHV 
HSMDRLCRNL DDLRRIVKDL TSRGVLVRFH KEGLSFTGED SPMSNLLLSM LGAVAEFERS
IILERQREGI QIAKVEGKYK GRKASLTKER VLELQRRAGA GEKKTVLARE FGVSRETVYT
YLNTEKSASV G