Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3532 |
Symbol | |
ID | 4686178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3751272 |
End bp | 3752324 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639836546 |
Product | porin |
Protein accession | YP_983750 |
Protein GI | 121606421 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.869887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAGAA ATTTGATTAC GGTGGCCTTG CTCGGTTGGG CTGCTTGCGC TTCGGCACAG TCGAGCGTCA CCCTGTATGG CGTCGCCGAT GGCTGGGTCG GTCAAACGAC CAGCAAGGCC GGGACGGCGC CTACCGACAG AACCAGCGTC GTGGAAAGCG ATGGCCTGTC AGCCAGCCGA TGGGGCATTC GTGGCTCGGA AGACTTGGGA GGCGGCCTGC GCGCCAACTT TGTGCTGGAG CAGGCTGTCA GCATCGACAA CGGCACGATC AAGAACGTAT CGGCCTCGAA CGTCGGCTTC AACCGCGCGG CCTATGTCGG CCTGTCCGGC GGCTTCGGCG AGGTGCGGCT GGGCCGCATG CTGGGCGCAT TTGACGCTTT GCGCGGCCCT TTCAACCAGT TGTATGACGC TTCGGGCTTT GCATCCACCG GCACGGTCTG GGGCCTGGGC ACCACGGCAT CTAGCTCTCA GGCGGCAGTG ACCAGCAGCG ACTACCTGGC GCGCCTCAAC AACACCTTCA TGTATGCAAC GCCGGTGTTG GGCGGTTTCA GTGGATCCAT GAGTTACAGC CCCGGAGAAG GCATCACCAC CGCCACGGCA GCGCCGCGCA GCATTTCCAG CCATGTGAAA TATGCCAATG GTCCACTCAA GATTGGCTAC GGCTACCAGG CCGAGCACTA CACCACCGGC ACCAACAAGT TCAAGCTGGC GTCTGGCGCC TATGACTGGG GCGTTGCCAG GTTGGTGGCC TCCATTCAGC GGCAGGACGA CAGCCGCATC GCTGGCGGCC AGTCCGCCAA CGAATGGCAG GCCGGCGTTG ATGTGCCGTT CGGCGCGGCC ATTCTGGCGG TCGGTTACGC CAGCTCGAAA ACCAAGAACG CCGCCGGCGT CGAGGTGGCC GATGCCCGGG GTTTGAGCCT GATGGGCATC TACAGCCTGA CGAAACGCAC CCGGCTTTAC GCCGCCCTGC GCAAGGTTGA CGCCAGGCGC ACCGATGGAA GCACCTCCAC GGAAGCATCG CGCTATGGCA TTGGCGTCAG CCACACGTTC TGA
|
Protein sequence | MKRNLITVAL LGWAACASAQ SSVTLYGVAD GWVGQTTSKA GTAPTDRTSV VESDGLSASR WGIRGSEDLG GGLRANFVLE QAVSIDNGTI KNVSASNVGF NRAAYVGLSG GFGEVRLGRM LGAFDALRGP FNQLYDASGF ASTGTVWGLG TTASSSQAAV TSSDYLARLN NTFMYATPVL GGFSGSMSYS PGEGITTATA APRSISSHVK YANGPLKIGY GYQAEHYTTG TNKFKLASGA YDWGVARLVA SIQRQDDSRI AGGQSANEWQ AGVDVPFGAA ILAVGYASSK TKNAAGVEVA DARGLSLMGI YSLTKRTRLY AALRKVDARR TDGSTSTEAS RYGIGVSHTF
|
| |