| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3487 |
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| Symbol | |
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| ID | 4688617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3701180 |
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| End bp | 3702454 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639836501 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_983705 |
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| Protein GI | 121606376 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0265796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTAC GACGCAATAC GCTCTGGAAT CTGGCTGGAA CCGGGCTTCC CCTTTTGCTG
GGGCTTGTCA CAATCCCTTA TCTCATCAAG CATGTGGGCG TTGAAGCGTT CGGGATTCTT
ACGCTGGTCT GGGCGCTGAT CGGCTATTTC AGCTTATTCG ACTTTGGCTT GGGACGGGCA
CTGACGCAAC AAGTGGCCGT TGCGCGTTCA GCGGGACTTC AGCAGTCCCT GCCAAGCTTG
GTTAAGACGG GACTCTGGTT CACGACGGCT ACAGGATTGG CGGGTGGATT GCTTCTTGGG
GCATTAGCCA ATCAATTGGC CGTACATTGG CTCAACGTCA GCCCCTCGTT GCAGTCCAGC
ACCTCGCAAG CCTTGCTCGT GGCGGCCATC GGGATACCCT TGACAACAGT GACGACTGGC
CTGCGGGGGA TTCTGGAGGC ATACGAAGAT TTTCGGATGG TGAATCTATT GCGAATAGTG
CTCGGGGCCG CAAATTTTGG TGTTCCTGCG CTGAGCGTCA TGCTGCTAGG GCCATCCCTG
GTAGGGATGG TGGTCGGCCT GATCGCCGCG CGGATTTTAG TCCTGGCTGC GCATGCGTGG
CAAGTTCACA AGAAACTTCC CTCCGGCTGG CTGACGGCTA AGTTGAGTAA AGATAATATG
CAGAAGTTAT TGTCTTTTGG AGCATGGATG ACTGTGTCAA ATATCATCAG CCCAATGATG
GTGACGGCTG ACCGATTTTT CATATCCGGG ATACTGGGTG CCAGCCTGGT GGCCTATTAC
ACCGTGCCAT TTGAAGCGCT AATTCGTGTA CTGGTTATAC CAAGCGCATT GACTTCAGCC
TTGTTTCCAA GGCTTGCTTC GTTGGCAGCA ACCAATCCGG AAGAAGCAAA ACGGTTATAT
AAAAAATGCC TGAAGATGGT GGTTGCAGTG TTGCTGCCTA TTTGTCTTGT GATCATGCTG
GGGTCTCGAT GGGGCTTGGC ACTATGGCTT GGAGAGGAGT TTGCGATTCA TGCATGGAAA
ATTGTCTGCA TACTGGCAGT CGGGCTTTTT TTAAATGGAG TTGCTCATGT GCCCTTCGCC
GCTATTCAAG CTGCGGGTGA TGCGAGAGCG ACAGCGCGCT TGCACATTTT GGAATTGGTC
ATCTATATAC CAGTCTTGTT GCTTCTCATG AAAACGCTTG GACTTGCAGG AGCGGCTATT
GCCTGGACTT TACGTGTTGG TCTGGATTTG ATTTTTCTGA TGATCTATAA AAATAAAGCA
AGTAATCTAT CGTAG
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| Protein sequence | MSLRRNTLWN LAGTGLPLLL GLVTIPYLIK HVGVEAFGIL TLVWALIGYF SLFDFGLGRA
LTQQVAVARS AGLQQSLPSL VKTGLWFTTA TGLAGGLLLG ALANQLAVHW LNVSPSLQSS
TSQALLVAAI GIPLTTVTTG LRGILEAYED FRMVNLLRIV LGAANFGVPA LSVMLLGPSL
VGMVVGLIAA RILVLAAHAW QVHKKLPSGW LTAKLSKDNM QKLLSFGAWM TVSNIISPMM
VTADRFFISG ILGASLVAYY TVPFEALIRV LVIPSALTSA LFPRLASLAA TNPEEAKRLY
KKCLKMVVAV LLPICLVIML GSRWGLALWL GEEFAIHAWK IVCILAVGLF LNGVAHVPFA
AIQAAGDARA TARLHILELV IYIPVLLLLM KTLGLAGAAI AWTLRVGLDL IFLMIYKNKA
SNLS
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