Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3047 |
Symbol | trpA |
ID | 4688339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3220270 |
End bp | 3221088 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639836060 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_983267 |
Protein GI | 121605938 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCA TTGAATCGAC TTTCTCCAGC CTTAAAACCC AGGGTCGCAA GGCCTTGATC CCCTACGTCA CGGCGGGCTT TCCGTTTGCC GATGTCACGC CCGAACTGAT GCACGGCATG GTGGCCGGCG GCGCTGACGT GATTGAACTG GGCATGCCGT TTTCCGACCC CAGCGCCGAT GGCCCGGTGA TCCAGAAGGC CGGAGAAAAA GCGCTTTCCT TCGGCATCGG CCTGGTTCAG GTGCTTGAAA TGGTGCGCAT TTTCCGCACA AAAGACCACA CGACGCCAGT CGTGCTCATG GGCTACGCCA ACCCAGTCGA GCGCTACGAC ATCAAGCATG GCGCAGGCGC CTCCGAAAGC GCCTTTATCC GCGATGCCGC CGCCGCCGGT GTCGATGGCA TGCTGATCGT TGACTATCCG CCAGAAGAGT GCGTGGAATT TTCCGCCAGA CTCAAGGCGC ACGGCATGGA CCTGATCTTT TTGCTGGCAC CCACCAGCAC CGACGCACGC ATGGCCCAGG TCGCCCAGGT CGCCAGCGGC TATGTGTATT ACGTGTCGCT CAAGGGCGTG ACCGGCGCCG GCACGCTGGA CGTGGATGCG GTCGAAGCCA TGCTGCCGCG CATTCGCCGG CATGTGAACG TGCCTGTCGG CGTGGGCTTT GGCATTCGCG ACGCCGCGAC CGCAAAGGCC ATAGGCAAAG TGGCTGATGC CGTGGTCATT GGCAGCAAGA TCATCCAGCT GATTGAAAAC CAGCCGCGCG ACCGGGTTGC CGCCGTGGCG CATGACTTTT TGAAGGAAAT CCGCTCGGCG CTGGACTGA
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Protein sequence | MSRIESTFSS LKTQGRKALI PYVTAGFPFA DVTPELMHGM VAGGADVIEL GMPFSDPSAD GPVIQKAGEK ALSFGIGLVQ VLEMVRIFRT KDHTTPVVLM GYANPVERYD IKHGAGASES AFIRDAAAAG VDGMLIVDYP PEECVEFSAR LKAHGMDLIF LLAPTSTDAR MAQVAQVASG YVYYVSLKGV TGAGTLDVDA VEAMLPRIRR HVNVPVGVGF GIRDAATAKA IGKVADAVVI GSKIIQLIEN QPRDRVAAVA HDFLKEIRSA LD
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