Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1596 |
Symbol | |
ID | 4686162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1679672 |
End bp | 1680583 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639834599 |
Product | 5-dehydro-4-deoxyglucarate dehydratase |
Protein accession | YP_981831 |
Protein GI | 121604502 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCGC AAGACCTCAA AACCATCGTC AGTTCCGGCC TCCTGTCTTT CCCCGTCACC GACTTTGACG AGCAGGGCGA TTTCCGTCCC AAGACCTACA TCGAGCGTCT CGAATGGCTG GCCCCTTACG GCGCCACCGC GCTGTTCGCC GCCGGCGGCA CGGGCGAGTT CTTTTCGCTG ACGGGCGACG AGTACCCGCT GATCATCAAG ACGGCGGTGA ACACCTGCGC CGGCAAGGTG CCGATCATTG CCGGCGTCGG CGGCCCGACC CGTTTTGCGA TTGCCTGCGC GCAGGAAGCC GAGCGCCTGG GCGCCCACGG CATCTTGCTG CTGCCGCACT ACCTGATGGA AGCCGGCCAG GAAGGGCTGA TTGCCCATGT CGAGGCCGTC TGCAAGAGCG TGAAGTTCGG CGTGATCGTG TACAACCGCA ACGTCTGCAA GCTCACGCCC GAGTCGCTGG CGATTCTGGC CGACCGCTGC CCGAACCTGA TCGGCTTCAA GGACGGCGTG GGCAACATCG AAACCATGTC GTCGATCTTC ATGAAGATGG GTGACCGCTT TTCTTATCTG GGCGGCCTGC CCACGGCCGA GGTCTATGCC GCCGCCTACA AAGCGCTGGG CACGCCGGTG TATTCGTCGG CGGTGTTCAA CTTCATCCCC AAGACGGCGA TGGATTTCTA CCATGCGGTT GCCAGCGACG ACCTGGCCAC ACAGCACCGC CTCTTGAGAG ACTTCTTCAT GCCTTACCTG GCGCTTCGCA ACAAGAATCC TGGCTACGCG GTCAGCATCG TCAAGGCCGG CGCCACCATC GTCGGGCATG ACGCCGGCCC GGTGCGTCCG CCCCTGACCG ACCTCAAGCC GGCCGAGATG GAAGAGCTGG CCGTGCTGAT CAAGAGCCTC GGCCCGCAGT AA
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Protein sequence | MNPQDLKTIV SSGLLSFPVT DFDEQGDFRP KTYIERLEWL APYGATALFA AGGTGEFFSL TGDEYPLIIK TAVNTCAGKV PIIAGVGGPT RFAIACAQEA ERLGAHGILL LPHYLMEAGQ EGLIAHVEAV CKSVKFGVIV YNRNVCKLTP ESLAILADRC PNLIGFKDGV GNIETMSSIF MKMGDRFSYL GGLPTAEVYA AAYKALGTPV YSSAVFNFIP KTAMDFYHAV ASDDLATQHR LLRDFFMPYL ALRNKNPGYA VSIVKAGATI VGHDAGPVRP PLTDLKPAEM EELAVLIKSL GPQ
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