Gene Pnap_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1527 
Symbol 
ID4690213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1618406 
End bp1618975 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content64% 
IMG OID639834530 
Productheat shock protein GrpE 
Protein accessionYP_981762 
Protein GI121604433 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA ACAAACAACC CGAACAGAAC CAAGACCTGA CCGGCGAGCC CAGCCCCGAA 
GAACTCGAAG CAGCGCAGGC GGCCGACGAG TTTGACGCGA TGAACGCGGC CAGCGAGGCC
CAGGCCCAGC TGGCAGTCCT GCAGGCCAAG AACACCGAAC TGTCCGACAA CTACCTGCGC
GCCAAGGCCG AGGCTGAAAA CGCCCGCCGC CGCGCCGAGG ATGAAATTTC CAAGGCGCGC
AAGTTCGCCC TTGAAAGCTT CGCCGAAAGC CTGCTGCCGG TGCTCGACAG CCTGGAAGCC
GGCCTGAACA TGAAGGAAGC CACGCTGGAG CAGTTGCGCG AAGGCTCGCA GGCCACGCTC
AAGCAGCTCA AGGCCGCGCT GGAGCGCAAC AAGGTCATCG AGATCAATCC AGTGGCCGGC
AGCAAATTCG ATCCGCACCA GCACCAGGCC ATCAGCATGG TGCCTGCCGC GCAGGAAGCC
AACACCGTGG TGGCCGTGCT GCAAAAGGGC TACCTGATTG CCGAGCGCGT GCTGCGCCCT
GCCCTGGTCA CGGTGGCAGC GCCGCAATAA
 
Protein sequence
MSENKQPEQN QDLTGEPSPE ELEAAQAADE FDAMNAASEA QAQLAVLQAK NTELSDNYLR 
AKAEAENARR RAEDEISKAR KFALESFAES LLPVLDSLEA GLNMKEATLE QLREGSQATL
KQLKAALERN KVIEINPVAG SKFDPHQHQA ISMVPAAQEA NTVVAVLQKG YLIAERVLRP
ALVTVAAPQ