Gene Pnap_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1513 
Symbol 
ID4688128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1601548 
End bp1602138 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content63% 
IMG OID639834516 
Productnuclear export factor GLE1 
Protein accessionYP_981748 
Protein GI121604419 
COG category[S] Function unknown 
COG ID[COG4549] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.233853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCT CAATCGCTAC AAAAAGCATG GCTGCCTGCG CACTCTGCGT GCTGGCCTTG 
CCTGTCTTCT CTCATGTTTC GCTGGAAGGC AAAACGGCTC CCGCCAGCAG CACCTACAAA
GCTGTTTTCC AGGTCGGCCA CGGCTGCCAG GGGTCGGCGA CCACGGGCAT CAGGGTTCAA
ATTCCCGCCG GTTTCCAGGG CGCCAAACCC TATCCGAAAG CCGGCTGGAC CTTGTCCGTC
CAGCAGGAAA AACTCGCCAG ACCCTACGAC AGCCACGGCA AGCCGGTCAC CGAAGACTTC
AGCGTGGTGA GTTGGACGGC GGCCGGCAAG GAGGCGGCGC TGCAGGACGC GTTTTTCGAC
GAGTTCGTGC TGCGCGGCAA ATTGCCCGAG ACCGCCGGGC CGCTGTGGTT CAAGGTGCTG
CAGACCTGCG AAAGCGGCAG CAACGACTGG AGTGAAGTTC CGGCCTCGGG CAGTTCCGCC
AAAGGCCTGA AATCGCCCGC GGTCTTGCTC GAAGTCACCG GCCCCGAAGC AGCAGCCGCC
GCCGCATCCA TGCCTGTCAT GGTGCATGCG CCAGGCGCCC ATCAACACTG A
 
Protein sequence
MNISIATKSM AACALCVLAL PVFSHVSLEG KTAPASSTYK AVFQVGHGCQ GSATTGIRVQ 
IPAGFQGAKP YPKAGWTLSV QQEKLARPYD SHGKPVTEDF SVVSWTAAGK EAALQDAFFD
EFVLRGKLPE TAGPLWFKVL QTCESGSNDW SEVPASGSSA KGLKSPAVLL EVTGPEAAAA
AASMPVMVHA PGAHQH