Gene Pnap_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1283 
Symbol 
ID4687581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1373452 
End bp1374237 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID639834286 
Productputative cytochrome c 
Protein accessionYP_981519 
Protein GI121604190 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.558146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCC CCATGACAAC AACGACCTTT TCGTATATAC GCAGACTGAT GATCCCCGGC 
GTCATGGCGG GCATGGCCTG GATGGCGGCA AGCGCCGCGA TAGCCGCCGC GCCGTTCGAA
GACAGCATGG CCCAGCGCAC ACTGGCCTGC ACCGCCTGCC ATGGCCCGCA GGGCCGCGCC
GCGCCCGACG GCTACTACCC GCGCCTGGCC GGCAAGCCGG CCGGCTACCT CTACAACCAA
CTGCTCAATT TTCGCGAGGG GCGCCGGCAC TACGGCCTGA TGACCCAACT GATCGACCCG
CTGAGCGACG CCTACCTGCT GGAAATCGCG CAGTATTTTT CAAGCCTCGA AGTGCCCTAC
CCCGCGCCGC CGCCCAGCAC GGCTTCGGCC GACGTGCTGC GCCGGGGCCG CCAGCTGGTG
ACCGAGGGCG ACGCAGCGCG CAAGCTGCCA GCCTGCGTGC AGTGCCACGG CCAGGCCATG
ACCGGCGTGG CACCTCACAT TCCCGGCCTG CTCGGGCTGC CGCGCGACTA CCTCAATGCG
CAGCTCGGCG CCTGGAAGGC CGGCCAGCGC CGCGCCCATG CGCCCGACTG CATGCAGGAC
GTGGTAAGCC GCCTGAGCCT GGAAGACATT AACGCCGTGG CCAGCTGGGC CGCCGCCCAG
CCCTTGCCCG CCGACACCCA TCCCGCCACT TCGCTGCCTG CCGTGGCGCC GGGCAGCGAA
GCCGTCCGTT GCGGCAGCGC GCCGCTGCCG GCCCGTGGCA CGGTCGAGCC GAAAGCCAAA
AAATGA
 
Protein sequence
MIRPMTTTTF SYIRRLMIPG VMAGMAWMAA SAAIAAAPFE DSMAQRTLAC TACHGPQGRA 
APDGYYPRLA GKPAGYLYNQ LLNFREGRRH YGLMTQLIDP LSDAYLLEIA QYFSSLEVPY
PAPPPSTASA DVLRRGRQLV TEGDAARKLP ACVQCHGQAM TGVAPHIPGL LGLPRDYLNA
QLGAWKAGQR RAHAPDCMQD VVSRLSLEDI NAVASWAAAQ PLPADTHPAT SLPAVAPGSE
AVRCGSAPLP ARGTVEPKAK K