Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1283 |
Symbol | |
ID | 4687581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1373452 |
End bp | 1374237 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639834286 |
Product | putative cytochrome c |
Protein accession | YP_981519 |
Protein GI | 121604190 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.558146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCC CCATGACAAC AACGACCTTT TCGTATATAC GCAGACTGAT GATCCCCGGC GTCATGGCGG GCATGGCCTG GATGGCGGCA AGCGCCGCGA TAGCCGCCGC GCCGTTCGAA GACAGCATGG CCCAGCGCAC ACTGGCCTGC ACCGCCTGCC ATGGCCCGCA GGGCCGCGCC GCGCCCGACG GCTACTACCC GCGCCTGGCC GGCAAGCCGG CCGGCTACCT CTACAACCAA CTGCTCAATT TTCGCGAGGG GCGCCGGCAC TACGGCCTGA TGACCCAACT GATCGACCCG CTGAGCGACG CCTACCTGCT GGAAATCGCG CAGTATTTTT CAAGCCTCGA AGTGCCCTAC CCCGCGCCGC CGCCCAGCAC GGCTTCGGCC GACGTGCTGC GCCGGGGCCG CCAGCTGGTG ACCGAGGGCG ACGCAGCGCG CAAGCTGCCA GCCTGCGTGC AGTGCCACGG CCAGGCCATG ACCGGCGTGG CACCTCACAT TCCCGGCCTG CTCGGGCTGC CGCGCGACTA CCTCAATGCG CAGCTCGGCG CCTGGAAGGC CGGCCAGCGC CGCGCCCATG CGCCCGACTG CATGCAGGAC GTGGTAAGCC GCCTGAGCCT GGAAGACATT AACGCCGTGG CCAGCTGGGC CGCCGCCCAG CCCTTGCCCG CCGACACCCA TCCCGCCACT TCGCTGCCTG CCGTGGCGCC GGGCAGCGAA GCCGTCCGTT GCGGCAGCGC GCCGCTGCCG GCCCGTGGCA CGGTCGAGCC GAAAGCCAAA AAATGA
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Protein sequence | MIRPMTTTTF SYIRRLMIPG VMAGMAWMAA SAAIAAAPFE DSMAQRTLAC TACHGPQGRA APDGYYPRLA GKPAGYLYNQ LLNFREGRRH YGLMTQLIDP LSDAYLLEIA QYFSSLEVPY PAPPPSTASA DVLRRGRQLV TEGDAARKLP ACVQCHGQAM TGVAPHIPGL LGLPRDYLNA QLGAWKAGQR RAHAPDCMQD VVSRLSLEDI NAVASWAAAQ PLPADTHPAT SLPAVAPGSE AVRCGSAPLP ARGTVEPKAK K
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