Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1142 |
Symbol | |
ID | 4688808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1213903 |
End bp | 1214826 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639834146 |
Product | periplasmic solute binding protein |
Protein accession | YP_981379 |
Protein GI | 121604050 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.987303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCG CATTTTGCAA ACTCCTGCTC AGCGGCATCG CCAGCGCCTG CCTGCTGCCG GGCGCCAGTT TCGCGGCCGA GCCACTGCCG GTCGTGGCCA GTTTCAGCAT CCTGGGCGAC CTGGTGCGCG TGGTCGGCGG CGAGCGCGTC AGCGTCACCA CGCTGGTCGG GCCTGACGAG GACGCGCATG TGTTCGAGCC CAAGCCGGCC GATGCCAGGG CCATCGTGCA AAGCCGGCTG CTGGTCGTCA ACGGCCTGGG CTTTGAGCCG TGGGCGCAAA AGCTGGCGAA GTCCGCCGGC TACAAGGGCG AAACCGTGGT GGCGTCGCAG GGCGTGAAGT CGCGCGCCAT GGCCGCAGAA AAAGGCCATG ATGAAAAGGG CCATCAGCAT GAGGAAACCG ATCCCCACGC CTGGCAAAAC CCCGACAACG TCGCGCTGTA CGCGCGCAAC ATCGCCGCCG CTCTCGCCAA GGCCGATCCC GCAGGCGCTA CCCTTTACCA GGCCAACGCC AGCGCCTACG TGAAGGAGCT GCAAACCCTC GACGCCTGGG CCAAGGCACA GTTCGCCACC TTGCCCGCCG CCAGGCGCAA GGTCATCACC TCGCACGATG CATTCGGCTA CTTCGCGGCG CAGTACCAGG TCAAATTCCT GGCGCCCCAG GGCGTTTCGA CCGACGCCGA ACCGAGCGCC AAGGAGGTGG CGCAGCTCAT CAGGCAAATC CAGCGCGAAA AGATCAGGGC CGTGTTCGTC GAAAACATGA GCAACCCCAA GCTGCTGGCG CAATTGAGCA AGGATGCGGG CGTGAGCGCC GGGCCTGCGC TGTATGTGGA TGCGCTGTCG GCCGCAGGCG GCCCCGCCGA CAGCTACCTC AAGCTGATGC GCCACAACGT GACGCAACTG GTGCGCGGGA TGCAGGCCAA CTGA
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Protein sequence | MKRAFCKLLL SGIASACLLP GASFAAEPLP VVASFSILGD LVRVVGGERV SVTTLVGPDE DAHVFEPKPA DARAIVQSRL LVVNGLGFEP WAQKLAKSAG YKGETVVASQ GVKSRAMAAE KGHDEKGHQH EETDPHAWQN PDNVALYARN IAAALAKADP AGATLYQANA SAYVKELQTL DAWAKAQFAT LPAARRKVIT SHDAFGYFAA QYQVKFLAPQ GVSTDAEPSA KEVAQLIRQI QREKIRAVFV ENMSNPKLLA QLSKDAGVSA GPALYVDALS AAGGPADSYL KLMRHNVTQL VRGMQAN
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