Gene Pnap_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0449 
Symbol 
ID4688277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp468166 
End bp468606 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID639833446 
Productresponse regulator receiver protein 
Protein accessionYP_980692 
Protein GI121603363 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATA AGCTGATACT TGTTGTTGAA GACAACCCGG ACCATCTGGA GCTGACAGTA 
TTAACACTGG AGGAGTTGGG CTTGAACGCC GAGATCGCCG TGGCCCGCGA TGGTGCCGCG
GCACTTGACT ACCTGTTTGG CCAGGGCCAG CACGCCGGCC GTGATGTCCG TCGGCAACCG
GCCTTTGTCC TGCTCGACAT GAAGCTGCCC AAGCTCTCCG GGCTTGACGT CTTGCGCAGC
GTTCGCAGCA ATCCCCTGAC GGCGCTGGTG CCGGTGATCA TGCTGACTTC TTCCAGTGAA
CATTCGGACA TGGTCGCCTG CTACCAGAGC GGGGCCAACA GCTTTGTTCG CAAGCCCGTC
GATTTTGTCG ATTTCACCGA AAAACTCAAC CGTTTGCAGG CGTACTGGCT GGGTGTGAAT
GAGTCGCTGG CGGCGGTTTG A
 
Protein sequence
MSDKLILVVE DNPDHLELTV LTLEELGLNA EIAVARDGAA ALDYLFGQGQ HAGRDVRRQP 
AFVLLDMKLP KLSGLDVLRS VRSNPLTALV PVIMLTSSSE HSDMVACYQS GANSFVRKPV
DFVDFTEKLN RLQAYWLGVN ESLAAV