Gene Pnap_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0396 
Symbol 
ID4687030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand- 
Start bp393640 
End bp394308 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID639833389 
Productphosphoglycerate mutase 
Protein accessionYP_980640 
Protein GI121603311 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.240142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACAC TTTATCTGGT ACGCCACGGC CAGGCTTCGT TTGGCTCCGA TGACTATGAC 
GTGCTGAGCC CGCTCGGACA GCGGCAAAGC CTGCGCCTGG GCGAATACTT CAAGGGCAAG 
GGGGTGACGT TCGAGGCCGC GCTGACCGGC ACGCTGAAGC GCCAGCACCA GACCTTCGCC 
GGCATTTGCG AAGGCCTGGG CGTGGAGCTG CAGGCAATGC CCTGGCCCGG TCTGAATGAA 
TACGACAGCG CCGCCGTGAT TGGCGCCATC CATCCGCAGC CGCTGGTCAG ACCCGACACG 
CCCGAGTTGT ACAAACACCA CTTTCGCCTG CTGAAAGACG GCCTGGCGCA ATGGATGGCC 
GGCGTGGCCA GCCCCCGGGG CATGCCGAGC TACAACGGGT TTGTTGCCGG AGTGACCAGC 
GCGCTGGACC ACATCCGCAG CCACTACGGC GGCCATGTGC TGCTGGTTTC CAGCGGCGGG 
CCGATTGCGA CGGCCGTCGG CCAGGTGCTG GGCGCCAGCC TTGAGGCGAC CATCGAGCTG 
AACCTGGGCA TCCGCAACTG CTCGGTCACC GAATTTGCCT TCACGCCCCA ACGCCACCGG 
CTGGTAACCT TCAACACGCT GCCGCACCTG GACGCGCCCG AACACGCCAG CTGGGTGACT 
TTCGCCTGA
 
Protein sequence
MGTLYLVRHG QASFGSDDYD VLSPLGQRQS LRLGEYFKGK GVTFEAALTG TLKRQHQTFA 
GICEGLGVEL QAMPWPGLNE YDSAAVIGAI HPQPLVRPDT PELYKHHFRL LKDGLAQWMA 
GVASPRGMPS YNGFVAGVTS ALDHIRSHYG GHVLLVSSGG PIATAVGQVL GASLEATIEL 
NLGIRNCSVT EFAFTPQRHR LVTFNTLPHL DAPEHASWVT FA