Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0167 |
Symbol | |
ID | 4688887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 178441 |
End bp | 179400 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639833160 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_980413 |
Protein GI | 121603084 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.201775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAAT TAACCAGTCT TAACCTCAAC GGCATCCGTT CCGCCGCCAG CAAGGGCCTG CAGGAATGGG TTGCCCAGTC CATGCCGGAT TGTATTTGCG TGCAGGAGCT GAAGGCGCAG GCCGCCGACC TGAGCGGGCG CTTCGAAGCC ATCGCCGGGC ACAAGGGCTA CTTTCAGTTT GCCGAGAAAA AGGGCTATTC GGGCGTCGGC ATCTACACCC GCCACGAGCC CAGCGACGTG ATCGTCGGCT ATGGCTCGAC CGAGTTCGAT GCCGAAGGCC GCTATGTCGA GCTGCGCTTT GACCGCCCCG GCCGCAGGCA CAGCCCGAAG CTGTCCATCA TCAGCTGCTA TTTCCCGAGC GGCTCGTCGG GCGAGGAGCG CCAGGCGGCC AAGTTCCGTT TCCTGGCCGA ACTCTATCCG CACCTGGCGG CCCTGAAACG CTGCGGCGGC GACAACCGTG AATTCGTGCT GTGTGGCGAC ATCAACATCG CGCACCAGGA AATCGACCTG AAAAACTTCA AGGGCAACAA GAAGAACAGC GGCTTTTTGC CCGAGGAACG CGCCTGGATG ACCGAGTTGT TGGCCCCCAC GCTCCCCACT GCGTGTGGTT CGCTGCCCCC CGAGGGGGCC GCTGCGCCTG CGGCCCGGCA AAGCCGTCTC CGTGGCCCTG GCTTGCAGGA AGCTTCTGCG GCCGTAGATG CTGCGCCTGC CCTGGACAGT TCGGCACAAG GCGGCGGCAT GGTCGATGTC TATCGCCGGC TGCATCCCGC CACCACCGAT GAGGCCTACA CCTGGTGGAG CAACCGGGGC CAGGCGTATG CCAAGAACGT CGGCTGGCGG CTGGACTACC ACCTGGCGAC GCCCGGCTTT GGCGCCACCG CCCATTCGGC GTCGATTCAC AAGGCGCAGC GCTTCAGCGA CCACGCGCCC CTGACGATTG AATACGACTG GGCGCTGTGA
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Protein sequence | MFKLTSLNLN GIRSAASKGL QEWVAQSMPD CICVQELKAQ AADLSGRFEA IAGHKGYFQF AEKKGYSGVG IYTRHEPSDV IVGYGSTEFD AEGRYVELRF DRPGRRHSPK LSIISCYFPS GSSGEERQAA KFRFLAELYP HLAALKRCGG DNREFVLCGD INIAHQEIDL KNFKGNKKNS GFLPEERAWM TELLAPTLPT ACGSLPPEGA AAPAARQSRL RGPGLQEASA AVDAAPALDS SAQGGGMVDV YRRLHPATTD EAYTWWSNRG QAYAKNVGWR LDYHLATPGF GATAHSASIH KAQRFSDHAP LTIEYDWAL
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