| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4343 |
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| Symbol | |
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| ID | 4669790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4824697 |
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| End bp | 4825686 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639825529 |
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| Product | porin |
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| Protein accession | YP_972657 |
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| Protein GI | 120612979 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.926116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA CCCATCGTCT GGCTCTCGCC GCTCTGGCCC TCCTGGGCAG CACCGCAGCG
TTCGCGCAAA GCAGCGTCAC GCTGTACGGT CGCGTGAACA CCACCGTCGA GCGCCAGAAG
GTGGGTGATT CCACCGTCAC CGGCCTGTTC AACAACGCAT CGCGCTTCGG CTTCAAGGGC
GTGGAAGACC TGGGTGGCGG CCTGAAGGCC GGCTTCCAGC TGGAAAGCGG CTTCAATTCC
GATACGGGCA CGACCGATTC CCGCGGCTTC TTCGCCCGCC AGAGCGAAGT GAACCTGTCG
GGCGGCTTCG GTATGGTCCG CCTGGGCCGC TGGACCGCCG AGTCCTACTT CGCCACGGCA
GACTACGTCA GCCTGCACAA CCATGACACC GGTTCGTCCG CCGACGCGTT CTACGCCAGC
GTGATGCGCA ACCAGTTCAC GAACTCCAAC TCGGTGGCCT ACCGCACCCC CAGCTTCGGC
GGCCTGACCG TCGAAGGCGC GGTGAGCATG CACGAGCAGA CCTCCGGCGG CAAGAACCTG
TACGACCTGG CCGCCAACTA CAACCTGGGT GCCCTGGCCC TGGGCGCCGG CTATTCCAAG
CTCGGCGACT CCAACCAGTT CGCCCTGCGC GCCCTCTACA CGACCGGCCC CTTCATGGTC
GGCGCCTACT ACCAGCGCAG CGACGACTGG GACGCCATGT CCGACACGGC CGCCGCGGTC
GGCAAGCGCG ACAACTTCCG CCTGTCCGGC GCCTACATCA TGGGCGCTTC GGAGTTCCAC
CTGAACGTGG GCCGTGCCAA CAGCTACAAG AACCTGACGG ACAGCGCCGC CACCCAGTAC
ACCCTGGGCT ACAACTACAA CCTGAGCAAG CGCACCAAGG TGTACGGCTA CTACACCCGC
GTCAACAACG ACCGCAACGC TTCCTACGCC ACCGGCGTGG CCGGCGCGGA CTTCAGCTCC
GTGGCTGTGG GCGTTCGCCA CAACTTCTGA
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| Protein sequence | MQKTHRLALA ALALLGSTAA FAQSSVTLYG RVNTTVERQK VGDSTVTGLF NNASRFGFKG
VEDLGGGLKA GFQLESGFNS DTGTTDSRGF FARQSEVNLS GGFGMVRLGR WTAESYFATA
DYVSLHNHDT GSSADAFYAS VMRNQFTNSN SVAYRTPSFG GLTVEGAVSM HEQTSGGKNL
YDLAANYNLG ALALGAGYSK LGDSNQFALR ALYTTGPFMV GAYYQRSDDW DAMSDTAAAV
GKRDNFRLSG AYIMGASEFH LNVGRANSYK NLTDSAATQY TLGYNYNLSK RTKVYGYYTR
VNNDRNASYA TGVAGADFSS VAVGVRHNF
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