Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2187 |
Symbol | |
ID | 4668935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2405068 |
End bp | 2406627 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639823392 |
Product | extracellular solute-binding protein |
Protein accession | YP_970539 |
Protein GI | 120610861 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.843737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTCGC TGGCGCGCGG CGCCTCGCGC CGCGACGTGC TGGCCATGTT CCTCGCGGGG GGCATGCAGG CGTCCCTGGC GGGCGGCCTG GCCACCATGG CCGCCAACGC GCATGCCCAG ACGCCCCGGC GGGGAGGGCG CATCCGCGTG GCGGGCGCGA CCGCGGCCGC CACCGACACG CTGGACCCCG CCAAGCAGTC CAACCAGACC GACTATTCGC GCGGCAACAT GCTCTACAAC GGGCTGTTCT CGCTGGATGG CAGCCTCACG CCACAGCCTG CGCTGGCCGA GTCGCACTCC ACGGCCGATG CCAAGACCTG GGTGTTCAAG CTGCGCAAGG GCGTGGTCTT CCATGACGGC AAGGCCCTGG CCCCCGAGGA CGTGGTGTTC TCGCTCATGC GGCACAAGGA CCCCGCCACG GCCTCCAAGG CCAAGGTGCT GGCCGACCAG ATCGAAAGCG TGAAGGTCTC CGGCCCCGGC GAGGTCACGG TGGTGCTGTC GCAGCCCAAC GCCGACCTGC CCGTGATCCT GGGCACCTTC CACTTCCACA TCGTCAAGGA CGGCACCACG GATTTCAATG CCGGCATCGG TACCGGCCCC TACAAGCTCA GGGAATTCAA GCCCGGCGTG CGCTCCCTGG TGGTGCGCAA CGACGCCTAC TGGAAACCCG GCAAGCCCTA CCTGGACGAG ATCGAGTTCG TCGGCATCGG CGACGAGACC GCGCGCGTGA ACGCGCTGCT GTCCGGCGGC ATGGACCTCG TCGCCTCGGT GAATCCCCGC GCGGTGGCCC GCGTCAAGGG CACGCCCGGC TACGCGATCT TCACCACGCA GTCGGGGCAG TATTCCGACC TCATCCTGCG CAAGGACATG GGCCCGGGCG CGAACCCGGA CTTCGTCCTG GCGATGAAGC ACCTGTTCGA CCGCGAGCAG ATGAAGAAGA CCATCGCGCT CGACTACGCG GTGCTGGGCA ACGACCAGCC CATCGATCCG ACCAACCGTT TCTACTTCGC GGGCCTGCCG CAGCGCACCT TCGATCTGGA CAAGGCCAAG TTCCACCTGC AGAAGTCGGG CGTGACGGGC AAGGTCCCGG TGGTCACGTC GCCCGCGGCC ATGTACTCCA CCGAGATCGC GCTGCTGCTG CAGCAGGCGG GCCAGCGCAT CGGCCTGGAG CTGGACGTCA AGCGCATGCC GGCCGACGGC TACTGGTCCA ACCATTGGCT GACCAACCCC GTGGGTTTCG GCAACGTGAA CCCGCGCCCC AGCGCCGACA CCCTGCTCAC GCAGTTCTTC AAGTCCGACG CTGCATGGAA CGAGTCGCGC TGGAAGAGCG CGCAGTTCGA CCAGTTGCTG CTGGCCGCAC GGGCCGAAAC CGACCAGGCC AAGCGCAAGC AGATGTATGC CGACATGCAG ACCATGATCC ACCAGGAAGC GGGCATCGGC ATCCCGCTGT TCCTCGCCAG CATCGACGGC CACTCGTCCA AGCTCAAGGG ACTGTCGCCG ATCCCGCTGG GCGGCATGAT GGGCTATGCG TTCGCGGAGC ACGTCTGGCT GGAGGCTTGA
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Protein sequence | MQSLARGASR RDVLAMFLAG GMQASLAGGL ATMAANAHAQ TPRRGGRIRV AGATAAATDT LDPAKQSNQT DYSRGNMLYN GLFSLDGSLT PQPALAESHS TADAKTWVFK LRKGVVFHDG KALAPEDVVF SLMRHKDPAT ASKAKVLADQ IESVKVSGPG EVTVVLSQPN ADLPVILGTF HFHIVKDGTT DFNAGIGTGP YKLREFKPGV RSLVVRNDAY WKPGKPYLDE IEFVGIGDET ARVNALLSGG MDLVASVNPR AVARVKGTPG YAIFTTQSGQ YSDLILRKDM GPGANPDFVL AMKHLFDREQ MKKTIALDYA VLGNDQPIDP TNRFYFAGLP QRTFDLDKAK FHLQKSGVTG KVPVVTSPAA MYSTEIALLL QQAGQRIGLE LDVKRMPADG YWSNHWLTNP VGFGNVNPRP SADTLLTQFF KSDAAWNESR WKSAQFDQLL LAARAETDQA KRKQMYADMQ TMIHQEAGIG IPLFLASIDG HSSKLKGLSP IPLGGMMGYA FAEHVWLEA
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