| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1803 |
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| Symbol | |
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| ID | 4668032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1957126 |
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| End bp | 1958505 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639823006 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_970162 |
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| Protein GI | 120610484 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.26222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCA TGCTTGCCGC GCGGTCGCGC ACCGCGGCCC GGCGCGTGCG CACGGCGCTG
CTGAACGTGC GCGACCTGCT GCTGTCGGCC GGGCCGCTGG CCTTCGTGGC CGTGGGGCTG
GTGGTGCTCG CCTACTGGTG GCTGCAGCCC AACCCGCCGC GCCGCGTGGT GCTGGCCACG
GGGCCGGCGC AGAGCGCGTA TGCGGAGTTC GGCCAGCGCT ACCGGCAGGC GCTGGCGGCC
GAGGGCATCG AGGTGGTGCT GAAGGAGAGC GAAGGCTCGT CGGCCAACCT GCAGTTGCTG
CGCGAGGGCG CGGCGGACCT GGCCTTCGTG CAGGGTGGCA CGGGCGAGCT GCGGCCGGAG
GATGCCGAGA CGCTCGAATC GCTGGGCAGC CTGTTCGTGG AGCCGGTGTG GATCTTCTAC
CGCGAGGACG CGGCGCGGCG CGTGGCACCG GGCGGGCGGC TCACGCGCCT CGCGCAACTG
CGTGGCCTGC GCGTGAACGT GGGCACGCCG GGCAGCGGCC TGCCGACGCT GGTGGACACG
CTGCTGGAGG CCAACCACGT GGAGCCGGCC CGGGTGCGGC GCACGCAGCT CGGGCAGACG
CCGGCCACGG TGGATTTTCT GGCGGGGCGG CTGGATGTGC TGGTGTTCGC CTCGGCGCCC
GAGTCGCTGA TGGTGCAGAT GCTGCTGCAG ACGCCGGGCG TGCGGCTGAT GGACTTCCCG
CAGAACGAGG CCTATGGCCG GCGCTTTCCG TTCCTCACGC CGGTCACGCT GCCGCGCGGC
GTGGTGGACC TGGCGGGCGA CGTGCCGCCG TCGGACGTGC GGCTGGTGGC CTCGACCACC
TCGCTGCTGG CGCGCGACGG CACGCACCCG GCGCTGCTGC AGCTCTTTGC GCAGAGCGCG
CAGACGCTGC ACGGCGGCGC GGGATGGTTC AACCGCGCGC GGGATTTCCC GAACACGCGG
CACATCGAGC TGCCGATCGC GGCCGAGGGC GAGCGCGCCA TCAACGGCTC GCCGCCGCTG
CTGCAGCGCT ACCTGCCGTT CTGGATCGCC AACCTCGTCG AGCGCATGTG GCTGGTGCTG
GGCGTGCTGC TGGCCGCGAT GCTGCCGCTG TCGCGCGTGG TGCCGCCGCT CTACCAGTTC
CGCGTGCGCT CGCGCGTGTT CCGCTGGTAC GGCCGCCTGC GCGAGATCGA GGACCAGTTC
GAGGTCGGCG GCCTGCCGCC GCAGGAGTTG CTGGCGCAGT TGGGCCAGCT GGAAGCGCAG
GTGGAGAAAG TGAGCGTGCC GCTGTCGTAC GCGGACGAGC TCTACGCGCT GCGGCACCAC
GTCCAGATCG TGCGGCAGAA GGTGGCCGCC GGCGTGGAGG CCCCGTCCGC CCGTCCTTAG
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| Protein sequence | MNVMLAARSR TAARRVRTAL LNVRDLLLSA GPLAFVAVGL VVLAYWWLQP NPPRRVVLAT
GPAQSAYAEF GQRYRQALAA EGIEVVLKES EGSSANLQLL REGAADLAFV QGGTGELRPE
DAETLESLGS LFVEPVWIFY REDAARRVAP GGRLTRLAQL RGLRVNVGTP GSGLPTLVDT
LLEANHVEPA RVRRTQLGQT PATVDFLAGR LDVLVFASAP ESLMVQMLLQ TPGVRLMDFP
QNEAYGRRFP FLTPVTLPRG VVDLAGDVPP SDVRLVASTT SLLARDGTHP ALLQLFAQSA
QTLHGGAGWF NRARDFPNTR HIELPIAAEG ERAINGSPPL LQRYLPFWIA NLVERMWLVL
GVLLAAMLPL SRVVPPLYQF RVRSRVFRWY GRLREIEDQF EVGGLPPQEL LAQLGQLEAQ
VEKVSVPLSY ADELYALRHH VQIVRQKVAA GVEAPSARP
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