Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1797 |
Symbol | |
ID | 4668191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1947358 |
End bp | 1949214 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639823000 |
Product | peptidase M14, carboxypeptidase A |
Protein accession | YP_970156 |
Protein GI | 120610478 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCAGC CATTCGACGC CCTCCGCCCC TCCAGGACCG CAGCCCCCGG CCTGCCGCCC CGCGCGCTCG CCCCCCTGGT CCTGGCCATC GCCGTGATGG CGGCGGGCTG CAGCAGCACG CCGCTGCCCC CCTGGCCCGC CAGCGCGCCG ACGCCCCTGC CCTCCACCGC GCAGACGCGC CCGGAAACGC CGCGCACCGT GCCCCCGCCG CTGGGCACCA CGCGCGCGGA AGTGGTGACC ACCCCGATCG CCGACACCCC GATCGTGCCG CAGCCGGAAG GCGCGCCCTC CCCGTCCGCC GCCGCACCGG CCGAGGCCCT GCCCTACTCC GCCGCCGTCG CGGCGCGGTT CCCCGATCCG CCGGTGCGCT ACGACACACC CGGCCTGGCC GACGGCCGCC GGGCCTTCAC CACCAATGCC GAGGCCTCGC AGTGGCTGCA CAGCCTCGCG CCCCAGGCGG GAAGCATGAC GAAGACGGCG GTGATCGAGT GGGGCCGCTC GCAGCGCGGC GTTCCGCTCG AGGCACTGGT GGCCACGCGC GGAGCCGGCA CTTCGCTGCA GGACCTGGAC GCCAGCGGCC GGCCCACCGT GGTGCTGATC GGCCAGCAGC ACGGCGACGA GCCCGCAGGC TCGGAAGCGT TGCTGGTGAT CGCGCGCGAA CTCACGCAGG GCCTGCTGGA GCCGCTGCTG GACCGCATCA ATGTCGTCGT CGTGCCGCGC GCGAACCCGG ACGGCGCGGA AGCCGGCACC CGCGTGACCG CGAACGGCAC CGACATGAAC CGCGACCACC TGCTGCTCAC CACCCCCGAG GCGCAGGGGC TGGCCCGGCT GGTGCGGGAC TACCGTCCCA TCGCCATCGT CGATGCGCAC GAATACACCG TGGCCGGCCG CTTCCTGCAG AAGTTCGGCG GCATCCAGCG CTACGACGCG CTGCTGCAGT ACGCCACCAC CGCCAACGTG GCGGAATTCC TCACCAAGGC GTCCCGCGAG TGGTACTACC AGCCCATGTC CGCCGCCCTG CAGGGCCAGG GGCTGACCAG CGACTGGTAC TACACCACCT CCACCGATCC GGCGGACATG CGCGTTTCCA TGGGCGGCAC GCGGCCGGAC ACCGGCCGCA ACGTGAACGG CCTCAAGAAC GCGGTGAGCC TGCTGGTGGA AACGCGCGGC GTGGGCATCG GCCGCACGCA CATCCAGCGC CGGGTGCACA CCCAGGTGAC GGCGCTGACC AGCGCGCTGC GCAGCACGGC CGAGCGCGCC GCCAACCTGG AGCAGGTACG CTCGTTCGTC GCGCGCGACA CGGTCGCGCA GGCCTGCCGC GGCGAGGTCG CCGTGGATGC GGGCCCGACC GCCACGCAGC GCGACCTGCT GATGCTCGAC CCGCAGACCG GTGCCGACAA GACCGTGCGC GTGGAATGGA ACTCGTCGCT CGACCTGCGC ACCCTCACCA GCCGGCCGCG CCCCTGCGGC TACTGGCTCG GCCCCTCCGC CAGCCAGGCG GTGGACCACC TGAAGATGAT GGGCGTGCAG GTGATGCGGG TGGCCGAGCA GGGATCGCTG CTGGCCGACA CCTACCGCGA AACCGCGCGC GACACCGCGC CGCGTGAGGA TGTGCGCGGC ACCGTGGCCG GCGCGGCGGA CACCGTGCGC GTGAAGGTGG AAACCGTGCG CACCGCCATC GACGCACCGG CCGGCAGCTA CTACGTGCCG CTCAACCAGC CCCTGGCGAA CCTCGCGGTC GCCGCGCTCG AGCCGGACAC GCAGAACAGC TATTTCGCGA ACCGGCTCAT CGGCTCGCTG GGCGACATGG CCCGGGTGAT GACCACGCCG ACGCTGGTGT TCGAGGAACC GGACTGA
|
Protein sequence | MNQPFDALRP SRTAAPGLPP RALAPLVLAI AVMAAGCSST PLPPWPASAP TPLPSTAQTR PETPRTVPPP LGTTRAEVVT TPIADTPIVP QPEGAPSPSA AAPAEALPYS AAVAARFPDP PVRYDTPGLA DGRRAFTTNA EASQWLHSLA PQAGSMTKTA VIEWGRSQRG VPLEALVATR GAGTSLQDLD ASGRPTVVLI GQQHGDEPAG SEALLVIARE LTQGLLEPLL DRINVVVVPR ANPDGAEAGT RVTANGTDMN RDHLLLTTPE AQGLARLVRD YRPIAIVDAH EYTVAGRFLQ KFGGIQRYDA LLQYATTANV AEFLTKASRE WYYQPMSAAL QGQGLTSDWY YTTSTDPADM RVSMGGTRPD TGRNVNGLKN AVSLLVETRG VGIGRTHIQR RVHTQVTALT SALRSTAERA ANLEQVRSFV ARDTVAQACR GEVAVDAGPT ATQRDLLMLD PQTGADKTVR VEWNSSLDLR TLTSRPRPCG YWLGPSASQA VDHLKMMGVQ VMRVAEQGSL LADTYRETAR DTAPREDVRG TVAGAADTVR VKVETVRTAI DAPAGSYYVP LNQPLANLAV AALEPDTQNS YFANRLIGSL GDMARVMTTP TLVFEEPD
|
| |