| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1473 |
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| Symbol | |
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| ID | 4669777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1627945 |
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| End bp | 1631574 |
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| Gene Length | 3630 bp |
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| Protein Length | 1209 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639822676 |
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| Product | ImcF domain-containing protein |
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| Protein accession | YP_969838 |
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| Protein GI | 120610160 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCA AGATCTTTTC ATTCTTCTTC AACCGGTTCA CGCTGGTGCT GTGCGGCCTG
GTGCTGCTCA GCCTGCTGGT CTGGTTCGTC GGTCCGCTGG TCTATATCAA GCCCTACCAG
CCGCTCGAGA GCGAGGCGGT GCGCGGCTGG ATCATCGCCG CGCTGTTCGG CATCTGGTTC
CTGCGGCTGT TCATCCGGTG GTGGCGGGCC AAGGAGATGA ATGCACGCCT GCTGGGCCAG
CTGGCCCGCA TCGGCGCATC GGATGCCTCC GCCCCCGAGG CCGGTCCCGG CAAGGAGGAG
GTGGCCGAAC TCGAGAAGCG CTTCAAGGAG GCGGTCGATG TCCTGGGCAA GACCCGCTTC
GGGCAGACGG AGCAGGGCTG GTTCGGCCGG CTGTCCCGCC GCTACCTCTA CCAGTTGCCC
TGGTACCTCA TCATCGGTTC TCCGGGATCC GGCAAGACCA CGGCACTGGT CAATTCGGGC
CTCGATTTTC CTCTGGCCGC CCAGTTCGGC AAGGCGTCGA TCCGCGGCGT CGGCGGCACG
CGCAACTGCG ACTGGTGGTT CACCGACCAG GCCGTGCTGC TGGATACCGC CGGCCGCTAC
ACCACGCAGG AGAGCGACGA GGCGCAGGAC AGTGCCGCCT GGTCGGGGTT CCTCGGCCTG
CTGCGGCGCT TTCGCGGGCG GCAGCCCATC AACGGGGTGC TGGTCACCCT CAGCGTGCAG
GAGCTGCTGA GCGGCGGCGA TGCGGAGCGC GAGCGCCTGG CCCGGCTGAT CGGCCTGCGC
CTGGCCGAGC TGTGCGAGGG GCTGTCCATC AAGTTCCCGG TGTACGTGCT GGTCACCAAG
ACCGACCTGC TGGCCGGCTT CAACGAGTTC TTCGGCAACA TGACCCGCGA GGAGCGGGCA
CAGGTCTGGG GCTTCACCAA TCCCTATGTG GAAGGGCAGG CGCAGGAAGA CCCGGGGCTG
CAGTTCCGCA AGGAATTCGA CGGCCTGGCC GACCAGATCA ACCGGTTGCT GCCGCAGCGC
CTGCTGGCGG AGCCCGACCT CGCGCGCCGT GGCCAGATCT ATGGCCTGCC GCAGCAGTTC
GTCGGCCTGC GGGACGTGGT CCAGCAGACG CTGTCCACGA TCTTCGCGTC CTCGCGTTTC
AAGGAAAAGC CGCTGTTCCG CGGCGTCTAT TTCACCAGTG GCACGCAGGA GGGCATGCCG
TTCGACCGGG TGCTGTCCGC CCTGTCGCGG CGCTTCTCGG TGGCGCCTCC GGCCCATCCC
GCCGGGGAAG GGCGCGCGGG CAAGAGCTAT TTCATCGAGA CCCTGCTCAA GGGGGTCATC
TTCAACGAGG CCGGGCTGAC GGGACGCAAT GCCAAGAAGG AGCGCCAGTT GCGGCTGCTG
CAGGCCGCCG GCTTTTTCGC CCTGGCCGCG GGGCTGGCGG GCGCCACGAT CGCCTGGACG
ATCAGCCACG GCAACAACCA GAAATACCTG GACGAGGTGG CCGCGAAGGT GCCCACGCTC
AAGCAGGCGG TGGAGGAATC CCGCGACGCG GATCCCGAGA ACATGGTGGC GCTGCTGCCG
CTGCTGAACC ACGCCGAGGC CCTCGCCGTG AGCCAGCGCT ACACCGGCGA TTCGCCGCCG
CTCAGCTGGC GCTACGGATT GCTGCAGGTG CCCAAGGTGC AGACCGCTGC CGACGCGACC
TACATGCGGC TGCTGGAGGA TGCGTGGCTG CCCCGCCTCG CGCGGCACCT GCGCAATTCG
CTGCAGCAGG CCTCGACGGC CAACCCCGAG GCCAGCTACG AGGCGCTCAA GGTCTATCTG
ATGCTCTACG ATCCGGAGCG CTTCAACCCC CGCGTGGTGA AGGCCTGGAT GCTCAACGAG
TGGGAAGCCA CGCTGCCCCC GGCCCTGGTG CAGTCGGGCA TGCTGGACCA GCTGGCGCAC
CACCTCGACC GGCTCATGGA AGACCGTGCC CTGGTTTCGC CGATTCCGAT AGACCAGCCG
CTGGTGGACG AGGTGCGCCA ACGGCTGGCG CAGCTGTCGC CTGCGCAGCG GGCCTACAGC
CGGCTGAAGC AGTTGCTGAC CACGGGCACG GCGCTGCCGC CGGACTTCAC GCTGGTGCGG
GCCGCCGGCC CCGAGGCGCC GCAGGTGTTC ACGCGGCGCA GCGGCAAGCC GCTCACTCAG
GGGATTTCTG GACTGTTCAC CTACGACGGC TACTACGGCG TGTTCTCGCA TGAGCTGCCC
AAGGTGACCT CGCTGCTGGC GCAGGAGGAA ACCTGGGTGC TGGGCAAGGC GCAGGGGCAG
CGCAGCGTGG CCAACGAGGT CATGACCGGG CAGCTCGCGC TCGAGGTCAA GCGCCTCTAC
CTCATGGAGT ACGCCAAGGT CTGGGAGGAC TTCCTCGCCG ATGTGCGGCC CGTGCAGGTG
GCGTCGCTCG ACCAGGCCGG CGAGCAGGCG CGGCTGTATT CGTCCGCCAA TTCCAGCCTG
GAGCAGTTCA TCCGCGCGGT GGCCAAGGAA ACCACGCTGG GTCAGAAGCC GGGGGCCGGC
GGCAGCAGCA CCAGCAGCTG GCTGGGCGAG AAGATCAACC GCATCAAGGA GGAGCAGGAG
CAGCTCAGCC GCCTCACCGG CAAGCGGGTG AACATCGGCG GGCTCGCGGC CAGCACCAAC
CTCGAGGCCG ATCTGGTGGA CTTCCGCTTC CGCGAATACC GCCGTCTCGC CACCTCCAAC
GGATCGGGCC CGGCGCCCAT CGCCGCCAGC CTGCAGGTGC TCAACGAAGC CGCCGCGGTC
ATCTCGTCCG CGCGCCAGCA GATCAGTGCC GGCGGCACCG TGCCGCCGTC GCTCTCGCCG
GCCCTGGAGC GCGTGCGCAT GGAGGCCAAG CGCGTGCCGC CGCCCCTCAA CACCATGTAC
GAGGATCTGG CATCGTCCAC GTCGGCCATG GTAGGCCGCG ACGTGCGTGC CACCGTGGGC
AGCAACCTCA ATGCCACCAT CGGGACGTTC TGCCGCAGGG CGATCGGCGG CCGCTATCCC
TTCACCAAGG GATCGGCCAG CGACGTGACG AGCGACGACT TCGCCAGCCT GTTCTCGCCG
GGCGGCATGA TGGACGAGTT CTTCCGCAAC ACCCTGCAGC CGATGGTGGA CATCTCCACC
ACCCCCTGGC GCTTCCGCCA GGGTGTCGAT GGGACGCCGG TCGGTGGATC GGCCGCGCTG
GCCTCGTTCC AGCGCGCCGC GACCATCCGC GACGTGTATT TCCGGGCGGG CGGCAAGGTG
CCGTCCATCC GCATGGACAT CAAGCCGCTG GAAATGGACG CCTCCATTTC GCAGATGGTG
CTGGACATCG ACGGCGAGGT GCTGCGCTAC CAGCACGGCC CGCAGATCCC GAAATCGATG
GCCTGGCCCG GCACCCGGGG CACGGGCCAG GTCCGCCTGC AGATCACCGG GGGCGGTGCC
GAGAACACGG GCCTGGTGAC CGAGGGACCC TGGGCCGTGC ACCGTTTCTT CGACAAGGCC
CAGATTCTGC CGGGCAGCAC GCCCGAGCGC TTCGTCGCCG CCTTCGATAT CGGCGGGCGC
AAGCTGCGCT TCGAGGTCAC CACGGGCAGC GTGCTCAACC CGTTCCGTCT CAAGGCCATG
GAGGAGTTCG CGTGTCCTGG CAATCTCTGA
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| Protein sequence | MLRKIFSFFF NRFTLVLCGL VLLSLLVWFV GPLVYIKPYQ PLESEAVRGW IIAALFGIWF
LRLFIRWWRA KEMNARLLGQ LARIGASDAS APEAGPGKEE VAELEKRFKE AVDVLGKTRF
GQTEQGWFGR LSRRYLYQLP WYLIIGSPGS GKTTALVNSG LDFPLAAQFG KASIRGVGGT
RNCDWWFTDQ AVLLDTAGRY TTQESDEAQD SAAWSGFLGL LRRFRGRQPI NGVLVTLSVQ
ELLSGGDAER ERLARLIGLR LAELCEGLSI KFPVYVLVTK TDLLAGFNEF FGNMTREERA
QVWGFTNPYV EGQAQEDPGL QFRKEFDGLA DQINRLLPQR LLAEPDLARR GQIYGLPQQF
VGLRDVVQQT LSTIFASSRF KEKPLFRGVY FTSGTQEGMP FDRVLSALSR RFSVAPPAHP
AGEGRAGKSY FIETLLKGVI FNEAGLTGRN AKKERQLRLL QAAGFFALAA GLAGATIAWT
ISHGNNQKYL DEVAAKVPTL KQAVEESRDA DPENMVALLP LLNHAEALAV SQRYTGDSPP
LSWRYGLLQV PKVQTAADAT YMRLLEDAWL PRLARHLRNS LQQASTANPE ASYEALKVYL
MLYDPERFNP RVVKAWMLNE WEATLPPALV QSGMLDQLAH HLDRLMEDRA LVSPIPIDQP
LVDEVRQRLA QLSPAQRAYS RLKQLLTTGT ALPPDFTLVR AAGPEAPQVF TRRSGKPLTQ
GISGLFTYDG YYGVFSHELP KVTSLLAQEE TWVLGKAQGQ RSVANEVMTG QLALEVKRLY
LMEYAKVWED FLADVRPVQV ASLDQAGEQA RLYSSANSSL EQFIRAVAKE TTLGQKPGAG
GSSTSSWLGE KINRIKEEQE QLSRLTGKRV NIGGLAASTN LEADLVDFRF REYRRLATSN
GSGPAPIAAS LQVLNEAAAV ISSARQQISA GGTVPPSLSP ALERVRMEAK RVPPPLNTMY
EDLASSTSAM VGRDVRATVG SNLNATIGTF CRRAIGGRYP FTKGSASDVT SDDFASLFSP
GGMMDEFFRN TLQPMVDIST TPWRFRQGVD GTPVGGSAAL ASFQRAATIR DVYFRAGGKV
PSIRMDIKPL EMDASISQMV LDIDGEVLRY QHGPQIPKSM AWPGTRGTGQ VRLQITGGGA
ENTGLVTEGP WAVHRFFDKA QILPGSTPER FVAAFDIGGR KLRFEVTTGS VLNPFRLKAM
EEFACPGNL
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