| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1058 |
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| Symbol | |
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| ID | 4669591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1160241 |
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| End bp | 1161569 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639822257 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_969429 |
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| Protein GI | 120609751 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.861696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCT CTTCTTCCGC TGCCGCGAGC GCCGACGCCG CGCAGCCCCA TCGCCCGCTC
ACGCGCAGCG ACTACAAGAC CCTGGGCCTT TCCGCGCTGG GCGGCACGCT CGAGTTCTAC
GATTTCGTCA TCTACGTGTT CTTCGCCACG GTGGTGAGCG GCCTGTTCTT CCCGGCCGAC
ATGCCCGACT GGCTGCGCCA GCTGCAGACG TTCGGCATCT TCGCGGCGGG CTACCTGGCC
CGGCCGATCG GCGGCATCGT GATCGCCCAC TTCGGCGACA AGCTGGGCCG CAAGCGCATG
TTCAGCCTGT CGATCTTCCT GATGGCGGTG CCGACGCTGG TGATCGGCCT GCTGCCCACC
TACGCGAGCA TCGGCGTGGC GGCGCCGCTG CTGCTGCTGG CGATGCGCGT GCTGCAGGGC
GCGGCCATCG GCGGCGAGAT GCCCGGGGCC TGGGTGTTCG TGGCCGAACA CGTGCCGAAG
AACCGCTACG GCCTGGGCGT GGGCACGCTG ACGGCCGGCA TCACGGGCGG CATCCTGCTG
GGCTCGCTGG TGGCGATCGC CATCAACCGC ACGTACACGC CCGCCGAGGT GCAGGGCTTC
GCCTGGCGCA TTCCGTTCAT CCTCGGCGGC GTGTTCGGCC TGGTGTCGGT GTACCTGCGC
CGCTTCCTGC ACGAGACGCC GGTGTTCCAG GAGCTGGCCG CGCGCCGCGC CGTGGCGCGC
GAATTGCCGC TCAAGACCAT CTTCCGCGAC CACAAGGGCG CGATGCTGCT GGTGGCGCTG
ATGACCTGGG TGCTCTCCAC CGCCGTGGTG GTGGTGGTGC TGATCACGCC GTCGTACCTG
CAGAAGGTGT TCCACCTGCC CGCCACGCTG GCCCTGGAGG CCAACGCCGT GGCCACGCTC
ACGCTGACCA TCGGCTGCGT GGTGATGGGC TGGGCCACCG ACCGCTTCGG CACCCGCGCA
GTGATGCTGG CGGGCTGGGG CGGCCTGTTC CTGACCTCGT ACCTGTTCTA CCTGGGCCTG
CCCGGCACGC CGGAGACGCT GGTGCGCAAC TATGCGCTGG TGGGCTTTTT CGTGGGCTCG
ATCGCGCTGC TGCCGATCGT GGGCGTGCGC GCCTTCCCGC CGGACGTGCG CTTCTCGGGC
CTTTCGTTCT CCTACAACAT GGCCTATGCG GTGTTCGGCG GCATCACGCC GGTGCTGCTG
ACGGTGTGGA TGCAGCGCGA CCCGATGGCG CCCGCGCACT ACGTGGCGGC CATGGGGCTG
CTGGGCTTCG TGCTGGGCTT CGTACCGCTG GCCTCGCGCG GCTGGCAGCC TGCGCCCGCG
CGGGCCTGA
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| Protein sequence | MTSSSSAAAS ADAAQPHRPL TRSDYKTLGL SALGGTLEFY DFVIYVFFAT VVSGLFFPAD
MPDWLRQLQT FGIFAAGYLA RPIGGIVIAH FGDKLGRKRM FSLSIFLMAV PTLVIGLLPT
YASIGVAAPL LLLAMRVLQG AAIGGEMPGA WVFVAEHVPK NRYGLGVGTL TAGITGGILL
GSLVAIAINR TYTPAEVQGF AWRIPFILGG VFGLVSVYLR RFLHETPVFQ ELAARRAVAR
ELPLKTIFRD HKGAMLLVAL MTWVLSTAVV VVVLITPSYL QKVFHLPATL ALEANAVATL
TLTIGCVVMG WATDRFGTRA VMLAGWGGLF LTSYLFYLGL PGTPETLVRN YALVGFFVGS
IALLPIVGVR AFPPDVRFSG LSFSYNMAYA VFGGITPVLL TVWMQRDPMA PAHYVAAMGL
LGFVLGFVPL ASRGWQPAPA RA
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