Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0389 |
Symbol | |
ID | 4666243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 418782 |
End bp | 420086 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639821595 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_968770 |
Protein GI | 120609092 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACCGCT TGAGTGTCGA AACCGCCGTC TCCGCCGCCC CGCTCCGCCG CACAGCGCGG TCGGGGCTTT TCTGCCTGGC CCTGCTCGCA GCCGCCACTC TGGCGGCCTG CGGCAAGTCC GGCGGGTCCG ACCAGCAGGG CCAGGGCGGC ACCCCTCCGC CACCGCAGGT GGGCGTGGTG ACCGTCTCGC CGGGGGACGT GGGCCTGGTG ACGGAGCTTC CGGGCCGCCT GGAAGCATCG CGGGTGGCCC AGGTCCGCGC CCGAGCGGCC GGCATCCTGC AAAAGCGGCT CTTCACGGAA GGCAGCGACG TCAAGGCGGG CCAGCGCCTG TTCGCGATCG ACGACGCGCC CTACCGCGCC TCGCTGGAAA GCGCCCAGGC GAGCGTCGCC CAGGCCGAAG CCAATGTGGC CCAGGCCCGG GCCCTGGCCG AGCGCTACAA GCCACTGGTG GCCGTGAATG CCGTGAGCCG GCAGGAGTAC GACAACGCGG TCGCGTCCCA GAAGACGGCC GAGGCCAACC TGGCGGCAGC GCGTGCATCC GTCACCACGG CCCGCATCAA CCTGGGCTAC GCGGCCGTGA CGGCGCCCAT CTCCGGCCGC ATCGGCCGCG CGCTCGTCAC CGAGGGCGCG CTGGTGGGCC AGGGCGAGGC CACGCAGCTC GCGGTGATCC AGCAGATCGA TCCGCTCTAC GTCAACTTCA CCCAGTCCGC CTCCGACGCC CTGAAGCTCA AGGCCGGCCT CGCGAGCGGC AAGTACAAGC AGGCTGCAAA GGGCGCCGCC TCGGTCAGCG TGGTCATGGA AGACGGCAGC GTGCATCCGC AGACGGGCAA GCTGCTGTTC ACCGACCTGT CGGTGGACCC CACCAGCGGC CAGGTCACGC TGCGCGCCGA AGTGCCCAAT CCCGAACGGC AGCTGCTGCC CGGCCTGTAC GTGCGCGTGC GCCTGGAGCA GGCCCAGGTG GACAACGGTG TCCTGCTGCC CCAGCAGGCC GTGACGCGCT CCGCCAGGGG CGATACCGTC ATGGTCGTGG GCCCGGACAA CCACCTGGCG CCGCGCCCCG TGAAGCTCGG CCCGGCCCAG GGCACCAACT GGGTCGTGCT GGATGGCCTG AAGGCCGGCG AGAAGGTCAT GGTGGACGGC TTCCAGAAGC TGCCCCGCGG CAAGCCCGGC GACCCGATCG TGGTGCAGCC CGTGCCCTGG CAGCCCGCCG GTGCCGCCCC CGCGGGCGGC GCATCGGCGC CCGCCGCCGG AGCTTCCGCC GCACAGGCCC CCGCCTCCAG CGCCTCCGCC CCCGCGAAGC AGTAA
|
Protein sequence | MYRLSVETAV SAAPLRRTAR SGLFCLALLA AATLAACGKS GGSDQQGQGG TPPPPQVGVV TVSPGDVGLV TELPGRLEAS RVAQVRARAA GILQKRLFTE GSDVKAGQRL FAIDDAPYRA SLESAQASVA QAEANVAQAR ALAERYKPLV AVNAVSRQEY DNAVASQKTA EANLAAARAS VTTARINLGY AAVTAPISGR IGRALVTEGA LVGQGEATQL AVIQQIDPLY VNFTQSASDA LKLKAGLASG KYKQAAKGAA SVSVVMEDGS VHPQTGKLLF TDLSVDPTSG QVTLRAEVPN PERQLLPGLY VRVRLEQAQV DNGVLLPQQA VTRSARGDTV MVVGPDNHLA PRPVKLGPAQ GTNWVVLDGL KAGEKVMVDG FQKLPRGKPG DPIVVQPVPW QPAGAAPAGG ASAPAAGASA AQAPASSASA PAKQ
|
| |